Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 KRT18P48-201ENST00000434763 852 ntBASIC20.85■□□□□ 0.93
LINC00271P0C7V0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00271P0C7V0 IER3-202ENST00000376377 1350 ntBASIC20.85■□□□□ 0.93
LINC00271P0C7V0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.84■□□□□ 0.93
LINC00271P0C7V0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 KRT18P38-201ENST00000449496 1282 ntBASIC20.84■□□□□ 0.93
LINC00271P0C7V0 HOMER2P1-201ENST00000455653 964 ntBASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AC116407.4-201ENST00000623319 1061 ntBASIC20.84■□□□□ 0.93
LINC00271P0C7V0 KRT8P8-201ENST00000434750 1448 ntBASIC20.84■□□□□ 0.93
LINC00271P0C7V0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00271P0C7V0 AC005332.1-201ENST00000577698 1310 ntBASIC20.83■□□□□ 0.93
LINC00271P0C7V0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 CA15P1-201ENST00000481698 905 ntBASIC20.83■□□□□ 0.93
LINC00271P0C7V0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 AC008622.2-201ENST00000617006 1229 ntBASIC20.83■□□□□ 0.93
LINC00271P0C7V0 AL023973.1-201ENST00000624619 620 ntBASIC20.83■□□□□ 0.93
LINC00271P0C7V0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00271P0C7V0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.83■□□□□ 0.92
LINC00271P0C7V0 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 AL671277.2-201ENST00000458060 996 ntBASIC20.82■□□□□ 0.92
LINC00271P0C7V0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC00271P0C7V0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AL359075.1-203ENST00000462729 1002 ntBASIC20.81■□□□□ 0.92
LINC00271P0C7V0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 PRSS44-201ENST00000515154 1146 ntBASIC20.81■□□□□ 0.92
LINC00271P0C7V0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00271P0C7V0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms