Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
KRT78Q8N1N4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT78Q8N1N4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
KRT78Q8N1N4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
KRT78Q8N1N4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.01■□□□□ 0.63
KRT78Q8N1N4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 AC018553.1-201ENST00000616682 1458 ntBASIC19.01■□□□□ 0.63
KRT78Q8N1N4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 AC116351.2-201ENST00000606540 1585 ntBASIC19.01■□□□□ 0.63
KRT78Q8N1N4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 AFG3L1P-217ENST00000557444 2447 ntBASIC19.01■□□□□ 0.63
KRT78Q8N1N4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.01■□□□□ 0.63
KRT78Q8N1N4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
KRT78Q8N1N4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 RPS2P52-201ENST00000469610 820 ntBASIC19■□□□□ 0.63
KRT78Q8N1N4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19■□□□□ 0.63
KRT78Q8N1N4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19■□□□□ 0.63
KRT78Q8N1N4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19■□□□□ 0.63
KRT78Q8N1N4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19■□□□□ 0.63
KRT78Q8N1N4 SOX15-203ENST00000570788 1093 ntBASIC19■□□□□ 0.63
KRT78Q8N1N4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19■□□□□ 0.63
KRT78Q8N1N4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19■□□□□ 0.63
KRT78Q8N1N4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19■□□□□ 0.63
KRT78Q8N1N4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19■□□□□ 0.63
KRT78Q8N1N4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19■□□□□ 0.63
KRT78Q8N1N4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KRT78Q8N1N4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KRT78Q8N1N4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms