Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PABPC1P11940 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.18■□□□□ 0.82
PABPC1P11940 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.18■□□□□ 0.82
PABPC1P11940 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.18■□□□□ 0.82
PABPC1P11940 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.18■□□□□ 0.82
PABPC1P11940 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
PABPC1P11940 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PABPC1P11940 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PABPC1P11940 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PABPC1P11940 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.17■□□□□ 0.82
PABPC1P11940 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 AP002982.1-201ENST00000492365 877 ntBASIC20.17■□□□□ 0.82
PABPC1P11940 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.17■□□□□ 0.82
PABPC1P11940 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 AC073195.1-201ENST00000607241 877 ntBASIC20.17■□□□□ 0.82
PABPC1P11940 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.17■□□□□ 0.82
PABPC1P11940 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.17■□□□□ 0.82
PABPC1P11940 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PABPC1P11940 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.17■□□□□ 0.82
PABPC1P11940 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PABPC1P11940 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
PABPC1P11940 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PABPC1P11940 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PABPC1P11940 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.16■□□□□ 0.82
PABPC1P11940 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.16■□□□□ 0.82
PABPC1P11940 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.16■□□□□ 0.82
PABPC1P11940 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
PABPC1P11940 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PABPC1P11940 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PABPC1P11940 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PABPC1P11940 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PABPC1P11940 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PABPC1P11940 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.15■□□□□ 0.82
PABPC1P11940 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PABPC1P11940 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 FAM197Y1-201ENST00000421178 764 ntBASIC20.15■□□□□ 0.82
PABPC1P11940 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PABPC1P11940 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.15■□□□□ 0.82
PABPC1P11940 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.15■□□□□ 0.82
PABPC1P11940 CD177P1-201ENST00000606252 935 ntBASIC20.15■□□□□ 0.82
PABPC1P11940 AL353708.3-201ENST00000610272 989 ntBASIC20.15■□□□□ 0.82
PABPC1P11940 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.15■□□□□ 0.82
PABPC1P11940 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.15■□□□□ 0.82
PABPC1P11940 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PABPC1P11940 AP005212.1-201ENST00000581547 1997 ntBASIC20.15■□□□□ 0.82
PABPC1P11940 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PABPC1P11940 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PABPC1P11940 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PABPC1P11940 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PABPC1P11940 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PABPC1P11940 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
PABPC1P11940 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PABPC1P11940 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PABPC1P11940 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.14■□□□□ 0.81
PABPC1P11940 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.14■□□□□ 0.81
PABPC1P11940 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
PABPC1P11940 YBX1P10-201ENST00000444752 975 ntBASIC20.14■□□□□ 0.81
PABPC1P11940 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms