Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PABPC1P11940 AC073130.3-201ENST00000624389 2278 ntBASIC20.28■□□□□ 0.84
PABPC1P11940 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.27■□□□□ 0.84
PABPC1P11940 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PABPC1P11940 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PABPC1P11940 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.27■□□□□ 0.84
PABPC1P11940 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.27■□□□□ 0.84
PABPC1P11940 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.27■□□□□ 0.84
PABPC1P11940 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PABPC1P11940 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 AC004264.1-201ENST00000608354 794 ntBASIC20.27■□□□□ 0.84
PABPC1P11940 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PABPC1P11940 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PABPC1P11940 HTR7P1-201ENST00000538670 1336 ntBASIC20.27■□□□□ 0.83
PABPC1P11940 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
PABPC1P11940 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.26■□□□□ 0.83
PABPC1P11940 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.26■□□□□ 0.83
PABPC1P11940 AC113410.3-201ENST00000623366 203 ntBASIC20.26■□□□□ 0.83
PABPC1P11940 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
PABPC1P11940 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PABPC1P11940 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.26■□□□□ 0.83
PABPC1P11940 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
PABPC1P11940 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
PABPC1P11940 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.25■□□□□ 0.83
PABPC1P11940 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PABPC1P11940 TSPY7P-201ENST00000431358 1114 ntBASIC20.25■□□□□ 0.83
PABPC1P11940 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.25■□□□□ 0.83
PABPC1P11940 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.25■□□□□ 0.83
PABPC1P11940 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PABPC1P11940 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PABPC1P11940 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PABPC1P11940 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PABPC1P11940 AC116351.2-201ENST00000606540 1585 ntBASIC20.25■□□□□ 0.83
PABPC1P11940 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PABPC1P11940 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.24■□□□□ 0.83
PABPC1P11940 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.24■□□□□ 0.83
PABPC1P11940 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PABPC1P11940 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PABPC1P11940 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.24■□□□□ 0.83
PABPC1P11940 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PABPC1P11940 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.23■□□□□ 0.83
PABPC1P11940 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.23■□□□□ 0.83
PABPC1P11940 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.23■□□□□ 0.83
PABPC1P11940 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.23■□□□□ 0.83
PABPC1P11940 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.23■□□□□ 0.83
PABPC1P11940 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.23■□□□□ 0.83
PABPC1P11940 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.23■□□□□ 0.83
PABPC1P11940 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 AC020907.5-201ENST00000624372 1936 ntBASIC20.23■□□□□ 0.83
PABPC1P11940 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PABPC1P11940 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms