Protein–RNA interactions for Protein: Q07688

YPD1, Phosphorelay intermediate protein YPD1, yeastyeast

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPD1Q07688 YBR182C-AYBR182C-A 195 nt-1.82□□□□□ -2.7
YPD1Q07688 tD(GUC)QtD(GUC)Q 75 nt-1.86□□□□□ -2.71
YPD1Q07688 YLR286W-AYLR286W-A 135 nt-1.88□□□□□ -2.71
YPD1Q07688 YOR008C-AYOR008C-A 225 nt-1.88□□□□□ -2.71
YPD1Q07688 YBR131C-AYBR131C-A 90 nt-1.88□□□□□ -2.71
YPD1Q07688 tY(GUA)QtY(GUA)Q 84 nt-1.89□□□□□ -2.71
YPD1Q07688 YAL016C-BYAL016C-B 186 nt-1.89□□□□□ -2.71
YPD1Q07688 tF(GAA)QtF(GAA)Q 75 nt-1.91□□□□□ -2.72
YPD1Q07688 YOR329W-AYOR329W-A 210 nt-1.91□□□□□ -2.72
YPD1Q07688 YML054C-AYML054C-A 159 nt-1.94□□□□□ -2.72
YPD1Q07688 YPR197CYPR197C 564 nt-1.94□□□□□ -2.72
YPD1Q07688 YBR178WYBR178W 375 nt-1.95□□□□□ -2.72
YPD1Q07688 CDC65tQ(CUG)M 72 nt-1.97□□□□□ -2.72
YPD1Q07688 YNL205CYNL205C 423 nt-1.98□□□□□ -2.73
YPD1Q07688 YDL159C-BYDL159C-B 177 nt-1.99□□□□□ -2.73
YPD1Q07688 YPL038W-AYPL038W-A 192 nt-2□□□□□ -2.73
YPD1Q07688 snR77snR77 88 nt-2.01□□□□□ -2.73
YPD1Q07688 YER181CYER181C 324 nt-2.01□□□□□ -2.73
YPD1Q07688 YGR240C-AYGR240C-A 201 nt-2.07□□□□□ -2.74
YPD1Q07688 YDR413CYDR413C 576 nt-2.09□□□□□ -2.74
YPD1Q07688 YDR157WYDR157W 402 nt-2.11□□□□□ -2.75
YPD1Q07688 YNL097C-BYNL097C-B 123 nt-2.11□□□□□ -2.75
YPD1Q07688 YNL277W-AYNL277W-A 189 nt-2.11□□□□□ -2.75
YPD1Q07688 RPL39YJL189W 156 nt-2.12□□□□□ -2.75
YPD1Q07688 YLR222C-AYLR222C-A 231 nt-2.13□□□□□ -2.75
YPD1Q07688 snR55snR55 98 nt-2.18□□□□□ -2.76
YPD1Q07688 snR81snR81 201 nt-2.19□□□□□ -2.76
YPD1Q07688 YDL240C-AYDL240C-A 138 nt-2.21□□□□□ -2.76
YPD1Q07688 YMR315W-AYMR315W-A 108 nt-2.21□□□□□ -2.76
YPD1Q07688 Q0017Q0017 162 nt-2.22□□□□□ -2.76
YPD1Q07688 YKL118WYKL118W 312 nt-2.23□□□□□ -2.77
YPD1Q07688 YLR299C-AYLR299C-A 93 nt-2.23□□□□□ -2.77
YPD1Q07688 snR48snR48 113 nt-2.24□□□□□ -2.77
YPD1Q07688 YDR118W-AYDR118W-A 117 nt-2.26□□□□□ -2.77
YPD1Q07688 tL(UAA)QtL(UAA)Q 85 nt-2.28□□□□□ -2.77
YPD1Q07688 YOR376W-AYOR376W-A 156 nt-2.29□□□□□ -2.78
YPD1Q07688 YGL188C-AYGL188C-A 141 nt-2.3□□□□□ -2.78
YPD1Q07688 YOR102WYOR102W 351 nt-2.3□□□□□ -2.78
YPD1Q07688 YOR302WYOR302W 78 nt-2.32□□□□□ -2.78
YPD1Q07688 YBR196C-AYBR196C-A 150 nt-2.34□□□□□ -2.78
YPD1Q07688 GIM4YEL003W 336 nt-2.39□□□□□ -2.79
YPD1Q07688 YOL155W-AYOL155W-A 135 nt-2.39□□□□□ -2.79
YPD1Q07688 snR52snR52 92 nt-2.46□□□□□ -2.8
YPD1Q07688 VAR1Q0140 1197 nt-2.48□□□□□ -2.81
YPD1Q07688 YPR012WYPR012W 255 nt-2.52□□□□□ -2.81
YPD1Q07688 YHR180C-BYHR180C-B 105 nt-2.54□□□□□ -2.82
YPD1Q07688 YLR342W-AYLR342W-A 174 nt-2.54□□□□□ -2.82
YPD1Q07688 YPL152W-AYPL152W-A 99 nt-2.54□□□□□ -2.82
YPD1Q07688 YHL015W-AYHL015W-A 84 nt-2.55□□□□□ -2.82
YPD1Q07688 YBR126W-BYBR126W-B 144 nt-2.55□□□□□ -2.82
YPD1Q07688 YOR309CYOR309C 381 nt-2.57□□□□□ -2.82
YPD1Q07688 YOR316C-AYOR316C-A 210 nt-2.57□□□□□ -2.82
YPD1Q07688 snR65snR65 100 nt-2.65□□□□□ -2.83
YPD1Q07688 YKL106C-AYKL106C-A 120 nt-2.65□□□□□ -2.83
YPD1Q07688 YJL150WYJL150W 303 nt-2.67□□□□□ -2.84
YPD1Q07688 YNL198CYNL198C 303 nt-2.73□□□□□ -2.85
YPD1Q07688 snR80snR80 171 nt-2.81□□□□□ -2.86
YPD1Q07688 YBR109W-AYBR109W-A 225 nt-2.81□□□□□ -2.86
YPD1Q07688 snR56snR56 88 nt-2.86□□□□□ -2.87
YPD1Q07688 SOM1YEL059C-A 225 nt-2.87□□□□□ -2.87
YPD1Q07688 YBR296C-AYBR296C-A 120 nt-2.91□□□□□ -2.88
YPD1Q07688 YBL053WYBL053W 375 nt-2.92□□□□□ -2.88
YPD1Q07688 RPL41AYDL184C 78 nt-2.94□□□□□ -2.88
YPD1Q07688 YDR524W-CYDR524W-C 90 nt-2.96□□□□□ -2.88
YPD1Q07688 snR38snR38 95 nt-2.98□□□□□ -2.89
YPD1Q07688 snR6snR6 112 nt-3.01□□□□□ -2.89
YPD1Q07688 YOR231C-AYOR231C-A 201 nt-3.01□□□□□ -2.89
YPD1Q07688 YCR095W-AYCR095W-A 159 nt-3.04□□□□□ -2.9
YPD1Q07688 YOL083C-AYOL083C-A 141 nt-3.05□□□□□ -2.9
YPD1Q07688 YDR406W-AYDR406W-A 246 nt-3.07□□□□□ -2.9
YPD1Q07688 YHR175W-AYHR175W-A 150 nt-3.11□□□□□ -2.91
YPD1Q07688 YBL071C-BYBL071C-B 99 nt-3.15□□□□□ -2.91
YPD1Q07688 YGR151CYGR151C 336 nt-3.17□□□□□ -2.92
YPD1Q07688 YOR335W-AYOR335W-A 81 nt-3.18□□□□□ -2.92
YPD1Q07688 YDR543CYDR543C 300 nt-3.2□□□□□ -2.92
YPD1Q07688 snR73snR73 106 nt-3.22□□□□□ -2.92
YPD1Q07688 Q0144Q0144 330 nt-3.22□□□□□ -2.92
YPD1Q07688 YOL164W-AYOL164W-A 183 nt-3.22□□□□□ -2.92
YPD1Q07688 tR(ACG)Q2tR(ACG)Q2 74 nt-3.23□□□□□ -2.93
YPD1Q07688 snR47snR47 99 nt-3.32□□□□□ -2.94
YPD1Q07688 RPL41BYDL133C-A 78 nt-3.34□□□□□ -2.94
YPD1Q07688 YAL037C-AYAL037C-A 93 nt-3.43□□□□□ -2.96
YPD1Q07688 YOL166W-AYOL166W-A 156 nt-3.45□□□□□ -2.96
YPD1Q07688 YBL100W-CYBL100W-C 120 nt-3.54□□□□□ -2.98
YPD1Q07688 tV(UAC)QtV(UAC)Q 76 nt-3.55□□□□□ -2.98
YPD1Q07688 YCL001W-BYCL001W-B 255 nt-3.55□□□□□ -2.98
YPD1Q07688 YDL114W-AYDL114W-A 114 nt-3.59□□□□□ -2.98
YPD1Q07688 YKL225WYKL225W 348 nt-3.61□□□□□ -2.99
YPD1Q07688 tS(GCU)Q1tS(GCU)Q1 86 nt-3.64□□□□□ -2.99
YPD1Q07688 YMR046W-AYMR046W-A 129 nt-3.65□□□□□ -2.99
YPD1Q07688 Q0142Q0142 177 nt-3.66□□□□□ -3
YPD1Q07688 snR85snR85 171 nt-3.68□□□□□ -3
YPD1Q07688 YDR524C-AYDR524C-A 120 nt-3.69□□□□□ -3
YPD1Q07688 SPG3YDR504C 384 nt-3.72□□□□□ -3
YPD1Q07688 YNL337WYNL337W 255 nt-3.85□□□□□ -3.03
YPD1Q07688 YLR466C-BYLR466C-B 117 nt-3.95□□□□□ -3.04
YPD1Q07688 YDL159W-AYDL159W-A 132 nt-4.02□□□□□ -3.05
YPD1Q07688 YNL338WYNL338W 159 nt-4.03□□□□□ -3.05
YPD1Q07688 YGR122C-AYGR122C-A 129 nt-4.06□□□□□ -3.06
YPD1Q07688 YDR034C-AYDR034C-A 177 nt-4.08□□□□□ -3.06
Retrieved 100 of 7,029 protein–RNA pairs in 71.1 ms