Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 RAD9YDR217C 3930 nt1.4□□□□□ -2.19
BDF2Q07442 snR75snR75 89 nt1.4□□□□□ -2.19
BDF2Q07442 YKL096C-BYKL096C-B 150 nt1.4□□□□□ -2.19
BDF2Q07442 RPM2YML091C 3609 nt1.39□□□□□ -2.19
BDF2Q07442 BEM3YPL115C 3387 nt1.39□□□□□ -2.19
BDF2Q07442 YLR399W-AYLR399W-A 105 nt1.38□□□□□ -2.19
BDF2Q07442 tD(GUC)QtD(GUC)Q 75 nt1.36□□□□□ -2.19
BDF2Q07442 tN(GUU)QtN(GUU)Q 71 nt1.35□□□□□ -2.19
BDF2Q07442 PRP16YKR086W 3216 nt1.35□□□□□ -2.19
BDF2Q07442 tF(GAA)BtF(GAA)B 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)FtF(GAA)F 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)GtF(GAA)G 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)H1tF(GAA)H1 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)H2tF(GAA)H2 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)MtF(GAA)M 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)P1tF(GAA)P1 73 nt1.34□□□□□ -2.19
BDF2Q07442 tF(GAA)P2tF(GAA)P2 73 nt1.34□□□□□ -2.19
BDF2Q07442 YLR299C-AYLR299C-A 93 nt1.34□□□□□ -2.19
BDF2Q07442 snR38snR38 95 nt1.34□□□□□ -2.19
BDF2Q07442 EST1YLR233C 2100 nt1.33□□□□□ -2.2
BDF2Q07442 YPR160W-AYPR160W-A 81 nt1.33□□□□□ -2.2
BDF2Q07442 YML054C-AYML054C-A 159 nt1.32□□□□□ -2.2
BDF2Q07442 AI1Q0050 2505 nt1.31□□□□□ -2.2
BDF2Q07442 SPT7YBR081C 3999 nt1.29□□□□□ -2.2
BDF2Q07442 YDL159C-BYDL159C-B 177 nt1.29□□□□□ -2.2
BDF2Q07442 snR69snR69 101 nt1.28□□□□□ -2.2
BDF2Q07442 RPL41AYDL184C 78 nt1.26□□□□□ -2.21
BDF2Q07442 NST1YNL091W 3723 nt1.25□□□□□ -2.21
BDF2Q07442 YHR180C-BYHR180C-B 105 nt1.25□□□□□ -2.21
BDF2Q07442 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
BDF2Q07442 YPR137C-BYPR137C-B 5268 nt1.24□□□□□ -2.21
BDF2Q07442 SKI7YOR076C 2244 nt1.24□□□□□ -2.21
BDF2Q07442 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
BDF2Q07442 CSE1YGL238W 2883 nt1.24□□□□□ -2.21
BDF2Q07442 YGR122C-AYGR122C-A 129 nt1.24□□□□□ -2.21
BDF2Q07442 UTP20YBL004W 7482 nt1.23□□□□□ -2.21
BDF2Q07442 YBR296C-AYBR296C-A 120 nt1.23□□□□□ -2.21
BDF2Q07442 YSP1YHR155W 3687 nt1.22□□□□□ -2.21
BDF2Q07442 ULP2YIL031W 3105 nt1.22□□□□□ -2.21
BDF2Q07442 NIP1YMR309C 2439 nt1.22□□□□□ -2.21
BDF2Q07442 YNL054W-BYNL054W-B 5250 nt1.22□□□□□ -2.21
BDF2Q07442 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
BDF2Q07442 YPL060C-AYPL060C-A 3315 nt1.2□□□□□ -2.22
BDF2Q07442 RDS3YPR094W 324 nt1.19□□□□□ -2.22
BDF2Q07442 YPR117WYPR117W 7470 nt1.15□□□□□ -2.23
BDF2Q07442 BEM2YER155C 6504 nt1.14□□□□□ -2.23
BDF2Q07442 VAM6YDL077C 3150 nt1.13□□□□□ -2.23
BDF2Q07442 LTE1YAL024C 4308 nt1.13□□□□□ -2.23
BDF2Q07442 PET111YMR257C 2403 nt1.13□□□□□ -2.23
BDF2Q07442 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
BDF2Q07442 BUL2YML111W 2763 nt1.08□□□□□ -2.24
BDF2Q07442 tQ(UUG)QtQ(UUG)Q 76 nt1.07□□□□□ -2.24
BDF2Q07442 YLL006W-AYLL006W-A 177 nt1.07□□□□□ -2.24
BDF2Q07442 YMR160WYMR160W 2451 nt1.06□□□□□ -2.24
BDF2Q07442 RKR1YMR247C 4689 nt1.06□□□□□ -2.24
BDF2Q07442 DOP1YDR141C 5097 nt1.04□□□□□ -2.24
BDF2Q07442 YJL077W-AYJL077W-A 87 nt1.03□□□□□ -2.24
BDF2Q07442 EMT1tM(CAU)D 73 nt1.02□□□□□ -2.25
BDF2Q07442 EMT5tM(CAU)J1 73 nt1.02□□□□□ -2.25
BDF2Q07442 EMT3tM(CAU)J2 73 nt1.02□□□□□ -2.25
BDF2Q07442 EMT4tM(CAU)M 73 nt1.02□□□□□ -2.25
BDF2Q07442 EMT2tM(CAU)O2 73 nt1.02□□□□□ -2.25
BDF2Q07442 YKL145W-AYKL145W-A 93 nt0.99□□□□□ -2.25
BDF2Q07442 YER090C-AYER090C-A 90 nt0.98□□□□□ -2.25
BDF2Q07442 YOR192C-BYOR192C-B 5313 nt0.98□□□□□ -2.25
BDF2Q07442 tT(AGU)BtT(AGU)B 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)CtT(AGU)C 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)DtT(AGU)D 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)HtT(AGU)H 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)I1tT(AGU)I1 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)I2tT(AGU)I2 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)JtT(AGU)J 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)N1tT(AGU)N1 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)N2tT(AGU)N2 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)O1tT(AGU)O1 73 nt0.91□□□□□ -2.26
BDF2Q07442 tT(AGU)O2tT(AGU)O2 73 nt0.91□□□□□ -2.26
BDF2Q07442 MLP1YKR095W 5628 nt0.9□□□□□ -2.27
BDF2Q07442 MLP2YIL149C 5040 nt0.89□□□□□ -2.27
BDF2Q07442 snR67snR67 82 nt0.88□□□□□ -2.27
BDF2Q07442 YDL114W-AYDL114W-A 114 nt0.87□□□□□ -2.27
BDF2Q07442 YOR376W-AYOR376W-A 156 nt0.86□□□□□ -2.27
BDF2Q07442 YPR159C-AYPR159C-A 102 nt0.86□□□□□ -2.27
BDF2Q07442 tV(UAC)QtV(UAC)Q 76 nt0.85□□□□□ -2.27
BDF2Q07442 YKL106C-AYKL106C-A 120 nt0.82□□□□□ -2.28
BDF2Q07442 THO2YNL139C 4794 nt0.81□□□□□ -2.28
BDF2Q07442 FMP27YLR454W 7887 nt0.76□□□□□ -2.29
BDF2Q07442 IQG1YPL242C 4488 nt0.75□□□□□ -2.29
BDF2Q07442 snR40snR40 97 nt0.73□□□□□ -2.29
BDF2Q07442 YBL100W-BYBL100W-B 5313 nt0.71□□□□□ -2.3
BDF2Q07442 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
BDF2Q07442 UTP10YJL109C 5310 nt0.66□□□□□ -2.3
BDF2Q07442 snR77snR77 88 nt0.61□□□□□ -2.31
BDF2Q07442 YOR186C-AYOR186C-A 210 nt0.61□□□□□ -2.31
BDF2Q07442 YML100W-AYML100W-A 174 nt0.6□□□□□ -2.31
BDF2Q07442 YOR316C-AYOR316C-A 210 nt0.57□□□□□ -2.32
BDF2Q07442 SOV1YMR066W 2697 nt0.57□□□□□ -2.32
BDF2Q07442 SBH2YER019C-A 267 nt0.51□□□□□ -2.33
BDF2Q07442 ESP1YGR098C 4893 nt0.42□□□□□ -2.34
BDF2Q07442 PAU9YBL108C-A 129 nt0.4□□□□□ -2.35
BDF2Q07442 YOL013W-AYOL013W-A 192 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms