Protein–RNA interactions for Protein: Q01454

CTF4, DNA polymerase alpha-binding protein, yeastyeast

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTF4Q01454 EST1YLR233C 2100 nt1.37□□□□□ -2.19
CTF4Q01454 NST1YNL091W 3723 nt1.37□□□□□ -2.19
CTF4Q01454 NUP188YML103C 4968 nt1.36□□□□□ -2.19
CTF4Q01454 snR69snR69 101 nt1.34□□□□□ -2.19
CTF4Q01454 ROM2YLR371W 4071 nt1.34□□□□□ -2.2
CTF4Q01454 UTP20YBL004W 7482 nt1.33□□□□□ -2.2
CTF4Q01454 YDL159C-BYDL159C-B 177 nt1.33□□□□□ -2.2
CTF4Q01454 YML054C-AYML054C-A 159 nt1.33□□□□□ -2.2
CTF4Q01454 SEC8YPR055W 3198 nt1.33□□□□□ -2.2
CTF4Q01454 CDC39YCR093W 6327 nt1.32□□□□□ -2.2
CTF4Q01454 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
CTF4Q01454 CSE1YGL238W 2883 nt1.32□□□□□ -2.2
CTF4Q01454 SWI4YER111C 3282 nt1.32□□□□□ -2.2
CTF4Q01454 YDL159W-AYDL159W-A 132 nt1.31□□□□□ -2.2
CTF4Q01454 PAU12YGR294W 363 nt1.31□□□□□ -2.2
CTF4Q01454 PAU24YBR301W 363 nt1.31□□□□□ -2.2
CTF4Q01454 YLR399W-AYLR399W-A 105 nt1.3□□□□□ -2.2
CTF4Q01454 YLR149C-AYLR149C-A 87 nt1.29□□□□□ -2.2
CTF4Q01454 YER078W-AYER078W-A 165 nt1.28□□□□□ -2.2
CTF4Q01454 snR38snR38 95 nt1.28□□□□□ -2.2
CTF4Q01454 YSP1YHR155W 3687 nt1.27□□□□□ -2.21
CTF4Q01454 RPL41AYDL184C 78 nt1.26□□□□□ -2.21
CTF4Q01454 YHR180C-BYHR180C-B 105 nt1.26□□□□□ -2.21
CTF4Q01454 RDS3YPR094W 324 nt1.26□□□□□ -2.21
CTF4Q01454 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
CTF4Q01454 YPR137C-BYPR137C-B 5268 nt1.24□□□□□ -2.21
CTF4Q01454 YKL096C-BYKL096C-B 150 nt1.23□□□□□ -2.21
CTF4Q01454 ULP2YIL031W 3105 nt1.23□□□□□ -2.21
CTF4Q01454 AI1Q0050 2505 nt1.23□□□□□ -2.21
CTF4Q01454 YBR296C-AYBR296C-A 120 nt1.22□□□□□ -2.21
CTF4Q01454 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
CTF4Q01454 snR75snR75 89 nt1.2□□□□□ -2.22
CTF4Q01454 NIP1YMR309C 2439 nt1.19□□□□□ -2.22
CTF4Q01454 SKI7YOR076C 2244 nt1.19□□□□□ -2.22
CTF4Q01454 YGR122C-AYGR122C-A 129 nt1.18□□□□□ -2.22
CTF4Q01454 DOP1YDR141C 5097 nt1.17□□□□□ -2.22
CTF4Q01454 YLL006W-AYLL006W-A 177 nt1.16□□□□□ -2.22
CTF4Q01454 YNL054W-BYNL054W-B 5250 nt1.15□□□□□ -2.23
CTF4Q01454 BUL2YML111W 2763 nt1.15□□□□□ -2.23
CTF4Q01454 BEM2YER155C 6504 nt1.15□□□□□ -2.23
CTF4Q01454 YPL060C-AYPL060C-A 3315 nt1.14□□□□□ -2.23
CTF4Q01454 tQ(UUG)QtQ(UUG)Q 76 nt1.12□□□□□ -2.23
CTF4Q01454 tF(GAA)BtF(GAA)B 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)FtF(GAA)F 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)GtF(GAA)G 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)H1tF(GAA)H1 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)H2tF(GAA)H2 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)MtF(GAA)M 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)P1tF(GAA)P1 73 nt1.11□□□□□ -2.23
CTF4Q01454 tF(GAA)P2tF(GAA)P2 73 nt1.11□□□□□ -2.23
CTF4Q01454 YJL077W-AYJL077W-A 87 nt1.11□□□□□ -2.23
CTF4Q01454 RKR1YMR247C 4689 nt1.1□□□□□ -2.23
CTF4Q01454 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
CTF4Q01454 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
CTF4Q01454 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
CTF4Q01454 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
CTF4Q01454 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
CTF4Q01454 YMR160WYMR160W 2451 nt1.08□□□□□ -2.24
CTF4Q01454 SCC2YDR180W 4482 nt1.07□□□□□ -2.24
CTF4Q01454 YOR192C-BYOR192C-B 5313 nt1.06□□□□□ -2.24
CTF4Q01454 PET111YMR257C 2403 nt1.01□□□□□ -2.25
CTF4Q01454 YER090C-AYER090C-A 90 nt0.99□□□□□ -2.25
CTF4Q01454 tT(AGU)BtT(AGU)B 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)CtT(AGU)C 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)DtT(AGU)D 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)HtT(AGU)H 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)I1tT(AGU)I1 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)I2tT(AGU)I2 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)JtT(AGU)J 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)N1tT(AGU)N1 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)N2tT(AGU)N2 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)O1tT(AGU)O1 73 nt0.97□□□□□ -2.25
CTF4Q01454 tT(AGU)O2tT(AGU)O2 73 nt0.97□□□□□ -2.25
CTF4Q01454 YOL014WYOL014W 375 nt0.96□□□□□ -2.26
CTF4Q01454 LTE1YAL024C 4308 nt0.93□□□□□ -2.26
CTF4Q01454 snR67snR67 82 nt0.9□□□□□ -2.27
CTF4Q01454 MLP2YIL149C 5040 nt0.88□□□□□ -2.27
CTF4Q01454 YKL145W-AYKL145W-A 93 nt0.85□□□□□ -2.27
CTF4Q01454 FMP27YLR454W 7887 nt0.84□□□□□ -2.27
CTF4Q01454 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
CTF4Q01454 THO2YNL139C 4794 nt0.81□□□□□ -2.28
CTF4Q01454 YDL114W-AYDL114W-A 114 nt0.79□□□□□ -2.28
CTF4Q01454 YKL106C-AYKL106C-A 120 nt0.79□□□□□ -2.28
CTF4Q01454 IQG1YPL242C 4488 nt0.76□□□□□ -2.29
CTF4Q01454 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
CTF4Q01454 YBL100W-BYBL100W-B 5313 nt0.73□□□□□ -2.29
CTF4Q01454 tV(UAC)QtV(UAC)Q 76 nt0.71□□□□□ -2.3
CTF4Q01454 YOR376W-AYOR376W-A 156 nt0.67□□□□□ -2.3
CTF4Q01454 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
CTF4Q01454 YML100W-AYML100W-A 174 nt0.59□□□□□ -2.31
CTF4Q01454 snR40snR40 97 nt0.54□□□□□ -2.32
CTF4Q01454 YOR186C-AYOR186C-A 210 nt0.53□□□□□ -2.32
CTF4Q01454 snR77snR77 88 nt0.52□□□□□ -2.33
CTF4Q01454 MLP1YKR095W 5628 nt0.5□□□□□ -2.33
CTF4Q01454 YOR316C-AYOR316C-A 210 nt0.49□□□□□ -2.33
CTF4Q01454 SOV1YMR066W 2697 nt0.48□□□□□ -2.33
CTF4Q01454 SBH2YER019C-A 267 nt0.44□□□□□ -2.34
CTF4Q01454 PAU9YBL108C-A 129 nt0.42□□□□□ -2.34
CTF4Q01454 snR128snR128 126 nt0.36□□□□□ -2.35
CTF4Q01454 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms