Protein–RNA interactions for Protein: P53687

HST3, NAD-dependent histone deacetylase HST3, yeastyeast

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HST3P53687 IRA1YBR140C 9279 nt1.71□□□□□ -2.14
HST3P53687 YER090C-AYER090C-A 90 nt1.71□□□□□ -2.14
HST3P53687 LAA1YJL207C 6045 nt1.71□□□□□ -2.14
HST3P53687 YLL006W-AYLL006W-A 177 nt1.7□□□□□ -2.14
HST3P53687 YOR093CYOR093C 4947 nt1.7□□□□□ -2.14
HST3P53687 FYV8YGR196C 2454 nt1.68□□□□□ -2.14
HST3P53687 TMA7YLR262C-A 195 nt1.67□□□□□ -2.14
HST3P53687 CAT8YMR280C 4302 nt1.66□□□□□ -2.14
HST3P53687 YHR214C-BYHR214C-B 5382 nt1.65□□□□□ -2.14
HST3P53687 YDL114W-AYDL114W-A 114 nt1.65□□□□□ -2.15
HST3P53687 tV(UAC)QtV(UAC)Q 76 nt1.65□□□□□ -2.15
HST3P53687 CFT1YDR301W 4074 nt1.63□□□□□ -2.15
HST3P53687 tT(UGU)HtT(UGU)H 72 nt1.61□□□□□ -2.15
HST3P53687 VPS15YBR097W 4365 nt1.59□□□□□ -2.15
HST3P53687 CLU1YMR012W 3834 nt1.59□□□□□ -2.15
HST3P53687 BST1YFL025C 3090 nt1.58□□□□□ -2.16
HST3P53687 SPT7YBR081C 3999 nt1.57□□□□□ -2.16
HST3P53687 MYO1YHR023W 5787 nt1.57□□□□□ -2.16
HST3P53687 YGR130CYGR130C 2451 nt1.56□□□□□ -2.16
HST3P53687 snR67snR67 82 nt1.54□□□□□ -2.16
HST3P53687 snR40snR40 97 nt1.53□□□□□ -2.16
HST3P53687 MEC1YBR136W 7107 nt1.53□□□□□ -2.17
HST3P53687 YMR247W-AYMR247W-A 144 nt1.51□□□□□ -2.17
HST3P53687 BRR2YER172C 6492 nt1.5□□□□□ -2.17
HST3P53687 YKL106C-AYKL106C-A 120 nt1.49□□□□□ -2.17
HST3P53687 YNL284C-BYNL284C-B 5268 nt1.48□□□□□ -2.17
HST3P53687 DNF3YMR162C 4971 nt1.48□□□□□ -2.17
HST3P53687 VAM6YDL077C 3150 nt1.45□□□□□ -2.18
HST3P53687 SSK2YNR031C 4740 nt1.44□□□□□ -2.18
HST3P53687 YMR160WYMR160W 2451 nt1.43□□□□□ -2.18
HST3P53687 YPR117WYPR117W 7470 nt1.41□□□□□ -2.18
HST3P53687 FIG2YCR089W 4830 nt1.37□□□□□ -2.19
HST3P53687 MLP2YIL149C 5040 nt1.37□□□□□ -2.19
HST3P53687 YOR192C-BYOR192C-B 5313 nt1.36□□□□□ -2.19
HST3P53687 BUD3YCL014W 4911 nt1.34□□□□□ -2.19
HST3P53687 CCH1YGR217W 6120 nt1.34□□□□□ -2.19
HST3P53687 tQ(UUG)E2tQ(UUG)E2 72 nt1.34□□□□□ -2.19
HST3P53687 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
HST3P53687 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
HST3P53687 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
HST3P53687 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
HST3P53687 YBL100W-BYBL100W-B 5313 nt1.22□□□□□ -2.21
HST3P53687 IML1YJR138W 4755 nt1.2□□□□□ -2.22
HST3P53687 snR77snR77 88 nt1.19□□□□□ -2.22
HST3P53687 YOR316C-AYOR316C-A 210 nt1.17□□□□□ -2.22
HST3P53687 PAU24YBR301W 363 nt1.14□□□□□ -2.23
HST3P53687 SOV1YMR066W 2697 nt1.13□□□□□ -2.23
HST3P53687 tV(UAC)BtV(UAC)B 74 nt1.12□□□□□ -2.23
HST3P53687 tV(UAC)DtV(UAC)D 74 nt1.12□□□□□ -2.23
HST3P53687 SCC2YDR180W 4482 nt1.1□□□□□ -2.23
HST3P53687 DOP1YDR141C 5097 nt1.09□□□□□ -2.23
HST3P53687 YML100W-AYML100W-A 174 nt1.07□□□□□ -2.24
HST3P53687 LTE1YAL024C 4308 nt1.06□□□□□ -2.24
HST3P53687 SBH2YER019C-A 267 nt1.05□□□□□ -2.24
HST3P53687 BEM2YER155C 6504 nt1.03□□□□□ -2.24
HST3P53687 tF(GAA)BtF(GAA)B 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)FtF(GAA)F 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)GtF(GAA)G 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)H1tF(GAA)H1 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)H2tF(GAA)H2 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)MtF(GAA)M 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)P1tF(GAA)P1 73 nt0.97□□□□□ -2.25
HST3P53687 tF(GAA)P2tF(GAA)P2 73 nt0.97□□□□□ -2.25
HST3P53687 YJR029WYJR029W 5268 nt0.94□□□□□ -2.26
HST3P53687 YPR137C-BYPR137C-B 5268 nt0.94□□□□□ -2.26
HST3P53687 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
HST3P53687 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
HST3P53687 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
HST3P53687 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
HST3P53687 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
HST3P53687 MLP1YKR095W 5628 nt0.88□□□□□ -2.27
HST3P53687 IQG1YPL242C 4488 nt0.86□□□□□ -2.27
HST3P53687 ESP1YGR098C 4893 nt0.85□□□□□ -2.27
HST3P53687 THO2YNL139C 4794 nt0.83□□□□□ -2.28
HST3P53687 UTP20YBL004W 7482 nt0.82□□□□□ -2.28
HST3P53687 YOR186C-AYOR186C-A 210 nt0.82□□□□□ -2.28
HST3P53687 YOL014WYOL014W 375 nt0.81□□□□□ -2.28
HST3P53687 YJL113WYJL113W 4647 nt0.8□□□□□ -2.28
HST3P53687 FMP27YLR454W 7887 nt0.76□□□□□ -2.29
HST3P53687 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
HST3P53687 tT(AGU)BtT(AGU)B 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)CtT(AGU)C 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)DtT(AGU)D 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)HtT(AGU)H 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)I1tT(AGU)I1 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)I2tT(AGU)I2 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)JtT(AGU)J 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)N1tT(AGU)N1 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)N2tT(AGU)N2 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)O1tT(AGU)O1 73 nt0.68□□□□□ -2.3
HST3P53687 tT(AGU)O2tT(AGU)O2 73 nt0.68□□□□□ -2.3
HST3P53687 YPR159C-AYPR159C-A 102 nt0.64□□□□□ -2.31
HST3P53687 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
HST3P53687 PAU9YBL108C-A 129 nt0.62□□□□□ -2.31
HST3P53687 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 6.3 ms