Protein–RNA interactions for Protein: P53438

SOK2, Protein SOK2, yeastyeast

Predicted RBP Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SOK2P53438 SIP4YJL089W 2490 nt1.39□□□□□ -2.19
SOK2P53438 BUL2YML111W 2763 nt1.38□□□□□ -2.19
SOK2P53438 NIP1YMR309C 2439 nt1.38□□□□□ -2.19
SOK2P53438 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
SOK2P53438 YBR296C-AYBR296C-A 120 nt1.38□□□□□ -2.19
SOK2P53438 YGR130CYGR130C 2451 nt1.37□□□□□ -2.19
SOK2P53438 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
SOK2P53438 PAU12YGR294W 363 nt1.36□□□□□ -2.19
SOK2P53438 snR38snR38 95 nt1.34□□□□□ -2.19
SOK2P53438 AI1Q0050 2505 nt1.33□□□□□ -2.2
SOK2P53438 YLR149C-AYLR149C-A 87 nt1.32□□□□□ -2.2
SOK2P53438 YKL096C-BYKL096C-B 150 nt1.31□□□□□ -2.2
SOK2P53438 SPT7YBR081C 3999 nt1.28□□□□□ -2.2
SOK2P53438 tQ(UUG)QtQ(UUG)Q 76 nt1.28□□□□□ -2.2
SOK2P53438 FIG2YCR089W 4830 nt1.28□□□□□ -2.2
SOK2P53438 SKI7YOR076C 2244 nt1.27□□□□□ -2.21
SOK2P53438 SSK2YNR031C 4740 nt1.27□□□□□ -2.21
SOK2P53438 YDL159W-AYDL159W-A 132 nt1.25□□□□□ -2.21
SOK2P53438 YER090C-AYER090C-A 90 nt1.2□□□□□ -2.22
SOK2P53438 YGR122C-AYGR122C-A 129 nt1.19□□□□□ -2.22
SOK2P53438 YNL284C-BYNL284C-B 5268 nt1.18□□□□□ -2.22
SOK2P53438 IML1YJR138W 4755 nt1.17□□□□□ -2.22
SOK2P53438 YNL054W-BYNL054W-B 5250 nt1.17□□□□□ -2.22
SOK2P53438 tH(GUG)E1tH(GUG)E1 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)E2tH(GUG)E2 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)G1tH(GUG)G1 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)G2tH(GUG)G2 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)HtH(GUG)H 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)KtH(GUG)K 72 nt1.16□□□□□ -2.22
SOK2P53438 tH(GUG)MtH(GUG)M 72 nt1.16□□□□□ -2.22
SOK2P53438 YPR117WYPR117W 7470 nt1.14□□□□□ -2.23
SOK2P53438 snR75snR75 89 nt1.13□□□□□ -2.23
SOK2P53438 YER078W-AYER078W-A 165 nt1.13□□□□□ -2.23
SOK2P53438 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
SOK2P53438 YOR192C-BYOR192C-B 5313 nt1.12□□□□□ -2.23
SOK2P53438 VAM6YDL077C 3150 nt1.11□□□□□ -2.23
SOK2P53438 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
SOK2P53438 LTE1YAL024C 4308 nt1.1□□□□□ -2.23
SOK2P53438 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
SOK2P53438 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
SOK2P53438 MLP2YIL149C 5040 nt1.07□□□□□ -2.24
SOK2P53438 snR67snR67 82 nt1.05□□□□□ -2.24
SOK2P53438 PET111YMR257C 2403 nt1.02□□□□□ -2.25
SOK2P53438 BUD3YCL014W 4911 nt1□□□□□ -2.25
SOK2P53438 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
SOK2P53438 BEM2YER155C 6504 nt0.98□□□□□ -2.25
SOK2P53438 YBL100W-BYBL100W-B 5313 nt0.97□□□□□ -2.25
SOK2P53438 PAU24YBR301W 363 nt0.96□□□□□ -2.26
SOK2P53438 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
SOK2P53438 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
SOK2P53438 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
SOK2P53438 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
SOK2P53438 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
SOK2P53438 MLP1YKR095W 5628 nt0.91□□□□□ -2.26
SOK2P53438 YMR160WYMR160W 2451 nt0.9□□□□□ -2.27
SOK2P53438 MYO1YHR023W 5787 nt0.88□□□□□ -2.27
SOK2P53438 IQG1YPL242C 4488 nt0.87□□□□□ -2.27
SOK2P53438 YKL106C-AYKL106C-A 120 nt0.83□□□□□ -2.28
SOK2P53438 YJR029WYJR029W 5268 nt0.83□□□□□ -2.28
SOK2P53438 YPR137C-BYPR137C-B 5268 nt0.83□□□□□ -2.28
SOK2P53438 YDL114W-AYDL114W-A 114 nt0.77□□□□□ -2.29
SOK2P53438 YOR186C-AYOR186C-A 210 nt0.76□□□□□ -2.29
SOK2P53438 UTP20YBL004W 7482 nt0.74□□□□□ -2.29
SOK2P53438 tV(UAC)QtV(UAC)Q 76 nt0.71□□□□□ -2.3
SOK2P53438 YML100W-AYML100W-A 174 nt0.7□□□□□ -2.3
SOK2P53438 tF(GAA)BtF(GAA)B 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)FtF(GAA)F 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)GtF(GAA)G 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)H1tF(GAA)H1 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)H2tF(GAA)H2 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)MtF(GAA)M 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)P1tF(GAA)P1 73 nt0.69□□□□□ -2.3
SOK2P53438 tF(GAA)P2tF(GAA)P2 73 nt0.69□□□□□ -2.3
SOK2P53438 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)HtT(AGU)H 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)I1tT(AGU)I1 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)I2tT(AGU)I2 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)JtT(AGU)J 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)N1tT(AGU)N1 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)N2tT(AGU)N2 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)O1tT(AGU)O1 73 nt0.66□□□□□ -2.3
SOK2P53438 tT(AGU)O2tT(AGU)O2 73 nt0.66□□□□□ -2.3
SOK2P53438 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
SOK2P53438 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
SOK2P53438 ESP1YGR098C 4893 nt0.62□□□□□ -2.31
SOK2P53438 YOR376W-AYOR376W-A 156 nt0.58□□□□□ -2.32
SOK2P53438 SOV1YMR066W 2697 nt0.58□□□□□ -2.32
SOK2P53438 YOL014WYOL014W 375 nt0.56□□□□□ -2.32
SOK2P53438 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
SOK2P53438 YOR316C-AYOR316C-A 210 nt0.54□□□□□ -2.32
SOK2P53438 YKL145W-AYKL145W-A 93 nt0.52□□□□□ -2.33
SOK2P53438 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
SOK2P53438 snR77snR77 88 nt0.46□□□□□ -2.34
SOK2P53438 SBH2YER019C-A 267 nt0.46□□□□□ -2.34
SOK2P53438 snR128snR128 126 nt0.42□□□□□ -2.34
SOK2P53438 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
SOK2P53438 PAU9YBL108C-A 129 nt0.38□□□□□ -2.35
SOK2P53438 snR40snR40 97 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 49.5 ms