Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 FYV8YGR196C 2454 nt1.83□□□□□ -2.12
MVP1P40959 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
MVP1P40959 CFT1YDR301W 4074 nt1.81□□□□□ -2.12
MVP1P40959 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
MVP1P40959 IRA1YBR140C 9279 nt1.8□□□□□ -2.12
MVP1P40959 tQ(UUG)QtQ(UUG)Q 76 nt1.79□□□□□ -2.12
MVP1P40959 DNF3YMR162C 4971 nt1.72□□□□□ -2.13
MVP1P40959 LAA1YJL207C 6045 nt1.72□□□□□ -2.13
MVP1P40959 YGR130CYGR130C 2451 nt1.72□□□□□ -2.13
MVP1P40959 MEC1YBR136W 7107 nt1.71□□□□□ -2.14
MVP1P40959 REV3YPL167C 4515 nt1.71□□□□□ -2.14
MVP1P40959 FIG2YCR089W 4830 nt1.69□□□□□ -2.14
MVP1P40959 tQ(UUG)E2tQ(UUG)E2 72 nt1.68□□□□□ -2.14
MVP1P40959 BRR2YER172C 6492 nt1.67□□□□□ -2.14
MVP1P40959 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
MVP1P40959 YER090C-AYER090C-A 90 nt1.65□□□□□ -2.15
MVP1P40959 SPT7YBR081C 3999 nt1.62□□□□□ -2.15
MVP1P40959 CCH1YGR217W 6120 nt1.6□□□□□ -2.15
MVP1P40959 NUP192YJL039C 5052 nt1.59□□□□□ -2.15
MVP1P40959 PET111YMR257C 2403 nt1.57□□□□□ -2.16
MVP1P40959 MLP2YIL149C 5040 nt1.56□□□□□ -2.16
MVP1P40959 YNL284C-BYNL284C-B 5268 nt1.52□□□□□ -2.17
MVP1P40959 snR67snR67 82 nt1.5□□□□□ -2.17
MVP1P40959 SSK2YNR031C 4740 nt1.49□□□□□ -2.17
MVP1P40959 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
MVP1P40959 VAM6YDL077C 3150 nt1.41□□□□□ -2.18
MVP1P40959 YOR192C-BYOR192C-B 5313 nt1.41□□□□□ -2.18
MVP1P40959 HKR1YDR420W 5409 nt1.4□□□□□ -2.19
MVP1P40959 YNL054W-BYNL054W-B 5250 nt1.37□□□□□ -2.19
MVP1P40959 RKR1YMR247C 4689 nt1.37□□□□□ -2.19
MVP1P40959 LTE1YAL024C 4308 nt1.36□□□□□ -2.19
MVP1P40959 YPR117WYPR117W 7470 nt1.35□□□□□ -2.19
MVP1P40959 SCC2YDR180W 4482 nt1.34□□□□□ -2.19
MVP1P40959 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
MVP1P40959 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
MVP1P40959 YDL114W-AYDL114W-A 114 nt1.31□□□□□ -2.2
MVP1P40959 YKL106C-AYKL106C-A 120 nt1.3□□□□□ -2.2
MVP1P40959 DOP1YDR141C 5097 nt1.27□□□□□ -2.21
MVP1P40959 YMR160WYMR160W 2451 nt1.26□□□□□ -2.21
MVP1P40959 BEM2YER155C 6504 nt1.24□□□□□ -2.21
MVP1P40959 IML1YJR138W 4755 nt1.22□□□□□ -2.21
MVP1P40959 PAU24YBR301W 363 nt1.21□□□□□ -2.22
MVP1P40959 tV(UAC)QtV(UAC)Q 76 nt1.18□□□□□ -2.22
MVP1P40959 tV(UAC)BtV(UAC)B 74 nt1.16□□□□□ -2.22
MVP1P40959 tV(UAC)DtV(UAC)D 74 nt1.16□□□□□ -2.22
MVP1P40959 YBL100W-BYBL100W-B 5313 nt1.15□□□□□ -2.23
MVP1P40959 MLP1YKR095W 5628 nt1.15□□□□□ -2.23
MVP1P40959 BUD3YCL014W 4911 nt1.14□□□□□ -2.23
MVP1P40959 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
MVP1P40959 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
MVP1P40959 YOR376W-AYOR376W-A 156 nt1.13□□□□□ -2.23
MVP1P40959 MYO1YHR023W 5787 nt1.02□□□□□ -2.25
MVP1P40959 YOR186C-AYOR186C-A 210 nt1.01□□□□□ -2.25
MVP1P40959 YML100W-AYML100W-A 174 nt0.97□□□□□ -2.25
MVP1P40959 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
MVP1P40959 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
MVP1P40959 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
MVP1P40959 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
MVP1P40959 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
MVP1P40959 IQG1YPL242C 4488 nt0.93□□□□□ -2.26
MVP1P40959 snR40snR40 97 nt0.91□□□□□ -2.26
MVP1P40959 YOR316C-AYOR316C-A 210 nt0.9□□□□□ -2.27
MVP1P40959 snR77snR77 88 nt0.86□□□□□ -2.27
MVP1P40959 SBH2YER019C-A 267 nt0.82□□□□□ -2.28
MVP1P40959 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
MVP1P40959 UTP20YBL004W 7482 nt0.77□□□□□ -2.29
MVP1P40959 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
MVP1P40959 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
MVP1P40959 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
MVP1P40959 ESP1YGR098C 4893 nt0.69□□□□□ -2.3
MVP1P40959 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
MVP1P40959 SOV1YMR066W 2697 nt0.68□□□□□ -2.3
MVP1P40959 PAU9YBL108C-A 129 nt0.63□□□□□ -2.31
MVP1P40959 snR128snR128 126 nt0.6□□□□□ -2.31
MVP1P40959 THO2YNL139C 4794 nt0.59□□□□□ -2.31
MVP1P40959 tF(GAA)BtF(GAA)B 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)FtF(GAA)F 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)GtF(GAA)G 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)H1tF(GAA)H1 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)H2tF(GAA)H2 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)MtF(GAA)M 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)P1tF(GAA)P1 73 nt0.55□□□□□ -2.32
MVP1P40959 tF(GAA)P2tF(GAA)P2 73 nt0.55□□□□□ -2.32
MVP1P40959 FMP27YLR454W 7887 nt0.51□□□□□ -2.33
MVP1P40959 YKL145W-AYKL145W-A 93 nt0.46□□□□□ -2.34
MVP1P40959 YOL013W-AYOL013W-A 192 nt0.46□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms