Protein–RNA interactions for Protein: P40535

CST6, ATF/CREB activator 2, yeastyeast

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CST6P40535 YMR247W-AYMR247W-A 144 nt1.9□□□□□ -2.11
CST6P40535 BPH1YCR032W 6504 nt1.89□□□□□ -2.11
CST6P40535 SWI4YER111C 3282 nt1.88□□□□□ -2.11
CST6P40535 YOR376W-AYOR376W-A 156 nt1.88□□□□□ -2.11
CST6P40535 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
CST6P40535 NUP145YGL092W 3954 nt1.87□□□□□ -2.11
CST6P40535 MON2YNL297C 4911 nt1.86□□□□□ -2.11
CST6P40535 YLL006W-AYLL006W-A 177 nt1.83□□□□□ -2.12
CST6P40535 YDL114W-AYDL114W-A 114 nt1.81□□□□□ -2.12
CST6P40535 YER090C-AYER090C-A 90 nt1.81□□□□□ -2.12
CST6P40535 IRA1YBR140C 9279 nt1.78□□□□□ -2.12
CST6P40535 LAA1YJL207C 6045 nt1.77□□□□□ -2.13
CST6P40535 FIG2YCR089W 4830 nt1.76□□□□□ -2.13
CST6P40535 MLP2YIL149C 5040 nt1.74□□□□□ -2.13
CST6P40535 VPS15YBR097W 4365 nt1.69□□□□□ -2.14
CST6P40535 snR40snR40 97 nt1.69□□□□□ -2.14
CST6P40535 NUP188YML103C 4968 nt1.69□□□□□ -2.14
CST6P40535 snR67snR67 82 nt1.68□□□□□ -2.14
CST6P40535 tV(UAC)QtV(UAC)Q 76 nt1.68□□□□□ -2.14
CST6P40535 YGR130CYGR130C 2451 nt1.67□□□□□ -2.14
CST6P40535 SPC110YDR356W 2835 nt1.67□□□□□ -2.14
CST6P40535 PMD1YER132C 5262 nt1.66□□□□□ -2.14
CST6P40535 TRM732YMR259C 4263 nt1.66□□□□□ -2.14
CST6P40535 SSK2YNR031C 4740 nt1.65□□□□□ -2.14
CST6P40535 YKL106C-AYKL106C-A 120 nt1.65□□□□□ -2.15
CST6P40535 tH(GUG)E1tH(GUG)E1 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)E2tH(GUG)E2 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)G1tH(GUG)G1 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)G2tH(GUG)G2 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)HtH(GUG)H 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)KtH(GUG)K 72 nt1.63□□□□□ -2.15
CST6P40535 tH(GUG)MtH(GUG)M 72 nt1.63□□□□□ -2.15
CST6P40535 CCH1YGR217W 6120 nt1.63□□□□□ -2.15
CST6P40535 IML1YJR138W 4755 nt1.62□□□□□ -2.15
CST6P40535 YNL284C-BYNL284C-B 5268 nt1.62□□□□□ -2.15
CST6P40535 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
CST6P40535 CDC39YCR093W 6327 nt1.59□□□□□ -2.16
CST6P40535 YMR160WYMR160W 2451 nt1.56□□□□□ -2.16
CST6P40535 YNL054W-BYNL054W-B 5250 nt1.51□□□□□ -2.17
CST6P40535 SPT7YBR081C 3999 nt1.5□□□□□ -2.17
CST6P40535 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
CST6P40535 VAM6YDL077C 3150 nt1.46□□□□□ -2.18
CST6P40535 tV(UAC)BtV(UAC)B 74 nt1.45□□□□□ -2.18
CST6P40535 tV(UAC)DtV(UAC)D 74 nt1.45□□□□□ -2.18
CST6P40535 YPR117WYPR117W 7470 nt1.36□□□□□ -2.19
CST6P40535 YOR192C-BYOR192C-B 5313 nt1.36□□□□□ -2.19
CST6P40535 SCC2YDR180W 4482 nt1.34□□□□□ -2.19
CST6P40535 LTE1YAL024C 4308 nt1.3□□□□□ -2.2
CST6P40535 snR77snR77 88 nt1.29□□□□□ -2.2
CST6P40535 BUD3YCL014W 4911 nt1.27□□□□□ -2.21
CST6P40535 YOR316C-AYOR316C-A 210 nt1.26□□□□□ -2.21
CST6P40535 RKR1YMR247C 4689 nt1.22□□□□□ -2.21
CST6P40535 BEM2YER155C 6504 nt1.19□□□□□ -2.22
CST6P40535 SBH2YER019C-A 267 nt1.18□□□□□ -2.22
CST6P40535 PAU24YBR301W 363 nt1.14□□□□□ -2.23
CST6P40535 YBL100W-BYBL100W-B 5313 nt1.14□□□□□ -2.23
CST6P40535 MYO1YHR023W 5787 nt1.12□□□□□ -2.23
CST6P40535 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
CST6P40535 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
CST6P40535 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
CST6P40535 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
CST6P40535 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
CST6P40535 YJR029WYJR029W 5268 nt1.1□□□□□ -2.23
CST6P40535 YPR137C-BYPR137C-B 5268 nt1.1□□□□□ -2.23
CST6P40535 MLP1YKR095W 5628 nt1.07□□□□□ -2.24
CST6P40535 YML100W-AYML100W-A 174 nt1.06□□□□□ -2.24
CST6P40535 SOV1YMR066W 2697 nt1.01□□□□□ -2.25
CST6P40535 DOP1YDR141C 5097 nt1□□□□□ -2.25
CST6P40535 UTP20YBL004W 7482 nt1□□□□□ -2.25
CST6P40535 IQG1YPL242C 4488 nt0.98□□□□□ -2.25
CST6P40535 YOR186C-AYOR186C-A 210 nt0.97□□□□□ -2.25
CST6P40535 tF(GAA)BtF(GAA)B 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)FtF(GAA)F 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)GtF(GAA)G 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)H1tF(GAA)H1 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)H2tF(GAA)H2 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)MtF(GAA)M 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)P1tF(GAA)P1 73 nt0.94□□□□□ -2.26
CST6P40535 tF(GAA)P2tF(GAA)P2 73 nt0.94□□□□□ -2.26
CST6P40535 tT(AGU)BtT(AGU)B 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)CtT(AGU)C 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)DtT(AGU)D 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)HtT(AGU)H 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)I1tT(AGU)I1 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)I2tT(AGU)I2 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)JtT(AGU)J 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)N1tT(AGU)N1 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)N2tT(AGU)N2 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)O1tT(AGU)O1 73 nt0.91□□□□□ -2.26
CST6P40535 tT(AGU)O2tT(AGU)O2 73 nt0.91□□□□□ -2.26
CST6P40535 YPR159C-AYPR159C-A 102 nt0.91□□□□□ -2.26
CST6P40535 ESP1YGR098C 4893 nt0.84□□□□□ -2.28
CST6P40535 PAU9YBL108C-A 129 nt0.79□□□□□ -2.28
CST6P40535 YJL113WYJL113W 4647 nt0.77□□□□□ -2.29
CST6P40535 THO2YNL139C 4794 nt0.76□□□□□ -2.29
CST6P40535 YOL014WYOL014W 375 nt0.74□□□□□ -2.29
CST6P40535 FMP27YLR454W 7887 nt0.74□□□□□ -2.29
CST6P40535 YKL145W-AYKL145W-A 93 nt0.72□□□□□ -2.29
CST6P40535 tC(GCA)QtC(GCA)Q 76 nt0.71□□□□□ -2.3
CST6P40535 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 84.8 ms