Protein–RNA interactions for Protein: P38248

ECM33, Cell wall protein ECM33, yeastyeast

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ECM33P38248 YPL060C-AYPL060C-A 3315 nt-0.69□□□□□ -2.52
ECM33P38248 snR69snR69 101 nt-0.69□□□□□ -2.52
ECM33P38248 YOR170WYOR170W 306 nt-0.69□□□□□ -2.52
ECM33P38248 YJL113WYJL113W 4647 nt-0.72□□□□□ -2.52
ECM33P38248 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
ECM33P38248 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
ECM33P38248 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
ECM33P38248 snR39BsnR39B 96 nt-0.73□□□□□ -2.53
ECM33P38248 YOL155W-AYOL155W-A 135 nt-0.74□□□□□ -2.53
ECM33P38248 snR65snR65 100 nt-0.75□□□□□ -2.53
ECM33P38248 snR33snR33 183 nt-0.75□□□□□ -2.53
ECM33P38248 snR56snR56 88 nt-0.76□□□□□ -2.53
ECM33P38248 YGR146C-AYGR146C-A 162 nt-0.76□□□□□ -2.53
ECM33P38248 tR(ACG)Q2tR(ACG)Q2 74 nt-0.77□□□□□ -2.53
ECM33P38248 YNL097C-BYNL097C-B 123 nt-0.78□□□□□ -2.53
ECM33P38248 RDS3YPR094W 324 nt-0.78□□□□□ -2.53
ECM33P38248 PMP2YEL017C-A 132 nt-0.79□□□□□ -2.54
ECM33P38248 YER090C-AYER090C-A 90 nt-0.79□□□□□ -2.54
ECM33P38248 YOR329W-AYOR329W-A 210 nt-0.79□□□□□ -2.54
ECM33P38248 YPL152W-AYPL152W-A 99 nt-0.79□□□□□ -2.54
ECM33P38248 snR50snR50 90 nt-0.81□□□□□ -2.54
ECM33P38248 YNL266WYNL266W 420 nt-0.83□□□□□ -2.54
ECM33P38248 YOR302WYOR302W 78 nt-0.83□□□□□ -2.54
ECM33P38248 YHL009W-BYHL009W-B 5409 nt-0.86□□□□□ -2.55
ECM33P38248 YGL188C-AYGL188C-A 141 nt-0.89□□□□□ -2.55
ECM33P38248 snR161snR161 161 nt-0.89□□□□□ -2.55
ECM33P38248 tD(GUC)QtD(GUC)Q 75 nt-0.92□□□□□ -2.56
ECM33P38248 JLP2YMR132C 627 nt-0.92□□□□□ -2.56
ECM33P38248 snR52snR52 92 nt-0.93□□□□□ -2.56
ECM33P38248 YLR286W-AYLR286W-A 135 nt-0.96□□□□□ -2.56
ECM33P38248 YLR342W-AYLR342W-A 174 nt-0.96□□□□□ -2.56
ECM33P38248 YNL205CYNL205C 423 nt-0.96□□□□□ -2.56
ECM33P38248 snR48snR48 113 nt-0.96□□□□□ -2.56
ECM33P38248 snR67snR67 82 nt-0.97□□□□□ -2.56
ECM33P38248 YDR524W-CYDR524W-C 90 nt-0.97□□□□□ -2.56
ECM33P38248 YOR231C-AYOR231C-A 201 nt-0.97□□□□□ -2.56
ECM33P38248 YBR178WYBR178W 375 nt-0.97□□□□□ -2.56
ECM33P38248 YBR223W-AYBR223W-A 120 nt-1.01□□□□□ -2.57
ECM33P38248 YDL159C-BYDL159C-B 177 nt-1.02□□□□□ -2.57
ECM33P38248 YNR077CYNR077C 255 nt-1.02□□□□□ -2.57
ECM33P38248 YOR102WYOR102W 351 nt-1.02□□□□□ -2.57
ECM33P38248 tL(UAA)QtL(UAA)Q 85 nt-1.03□□□□□ -2.57
ECM33P38248 snR80snR80 171 nt-1.04□□□□□ -2.58
ECM33P38248 YHL015W-AYHL015W-A 84 nt-1.05□□□□□ -2.58
ECM33P38248 SKI7YOR076C 2244 nt-1.09□□□□□ -2.58
ECM33P38248 YLR299C-AYLR299C-A 93 nt-1.17□□□□□ -2.6
ECM33P38248 tP(UGG)QtP(UGG)Q 72 nt-1.18□□□□□ -2.6
ECM33P38248 YBR196C-AYBR196C-A 150 nt-1.18□□□□□ -2.6
ECM33P38248 YDR406W-AYDR406W-A 246 nt-1.19□□□□□ -2.6
ECM33P38248 YML054C-AYML054C-A 159 nt-1.27□□□□□ -2.61
ECM33P38248 YNL198CYNL198C 303 nt-1.28□□□□□ -2.61
ECM33P38248 YJL150WYJL150W 303 nt-1.37□□□□□ -2.63
ECM33P38248 SOM1YEL059C-A 225 nt-1.38□□□□□ -2.63
ECM33P38248 YBL053WYBL053W 375 nt-1.39□□□□□ -2.63
ECM33P38248 YHR180C-BYHR180C-B 105 nt-1.41□□□□□ -2.64
ECM33P38248 tY(GUA)QtY(GUA)Q 84 nt-1.43□□□□□ -2.64
ECM33P38248 YGR240C-AYGR240C-A 201 nt-1.45□□□□□ -2.64
ECM33P38248 YCR095W-AYCR095W-A 159 nt-1.48□□□□□ -2.65
ECM33P38248 CDC65tQ(CUG)M 72 nt-1.48□□□□□ -2.65
ECM33P38248 YMR046W-AYMR046W-A 129 nt-1.48□□□□□ -2.65
ECM33P38248 snR77snR77 88 nt-1.51□□□□□ -2.65
ECM33P38248 YOR376W-AYOR376W-A 156 nt-1.51□□□□□ -2.65
ECM33P38248 Q0142Q0142 177 nt-1.53□□□□□ -2.65
ECM33P38248 SPG3YDR504C 384 nt-1.59□□□□□ -2.66
ECM33P38248 YKL106C-AYKL106C-A 120 nt-1.63□□□□□ -2.67
ECM33P38248 YMR315W-AYMR315W-A 108 nt-1.63□□□□□ -2.67
ECM33P38248 snR81snR81 201 nt-1.66□□□□□ -2.68
ECM33P38248 YOR316C-AYOR316C-A 210 nt-1.68□□□□□ -2.68
ECM33P38248 YGR151CYGR151C 336 nt-1.69□□□□□ -2.68
ECM33P38248 RPL41AYDL184C 78 nt-1.7□□□□□ -2.68
ECM33P38248 YBR296C-AYBR296C-A 120 nt-1.7□□□□□ -2.68
ECM33P38248 tM(CAU)Q1tM(CAU)Q1 76 nt-1.71□□□□□ -2.68
ECM33P38248 YOL083C-AYOL083C-A 141 nt-1.72□□□□□ -2.68
ECM33P38248 YBR109W-AYBR109W-A 225 nt-1.73□□□□□ -2.69
ECM33P38248 YLR466C-BYLR466C-B 117 nt-1.79□□□□□ -2.7
ECM33P38248 YBL071C-BYBL071C-B 99 nt-1.79□□□□□ -2.7
ECM33P38248 YCL001W-BYCL001W-B 255 nt-1.79□□□□□ -2.7
ECM33P38248 YBR126W-BYBR126W-B 144 nt-1.82□□□□□ -2.7
ECM33P38248 YOL164W-AYOL164W-A 183 nt-1.84□□□□□ -2.7
ECM33P38248 snR38snR38 95 nt-1.86□□□□□ -2.71
ECM33P38248 YNL338WYNL338W 159 nt-1.88□□□□□ -2.71
ECM33P38248 YAL037C-AYAL037C-A 93 nt-1.89□□□□□ -2.71
ECM33P38248 snR47snR47 99 nt-1.92□□□□□ -2.72
ECM33P38248 YBL100W-CYBL100W-C 120 nt-1.93□□□□□ -2.72
ECM33P38248 YOR309CYOR309C 381 nt-2□□□□□ -2.73
ECM33P38248 YNL337WYNL337W 255 nt-2.05□□□□□ -2.74
ECM33P38248 tS(GCU)Q1tS(GCU)Q1 86 nt-2.18□□□□□ -2.76
ECM33P38248 YKL225WYKL225W 348 nt-2.19□□□□□ -2.76
ECM33P38248 snR6snR6 112 nt-2.22□□□□□ -2.76
ECM33P38248 Q0032Q0032 291 nt-2.27□□□□□ -2.77
ECM33P38248 RPL41BYDL133C-A 78 nt-2.3□□□□□ -2.78
ECM33P38248 YGL041C-BYGL041C-B 183 nt-2.3□□□□□ -2.78
ECM33P38248 YDL114W-AYDL114W-A 114 nt-2.31□□□□□ -2.78
ECM33P38248 YOR335W-AYOR335W-A 81 nt-2.31□□□□□ -2.78
ECM33P38248 YDR543CYDR543C 300 nt-2.33□□□□□ -2.78
ECM33P38248 YGL007C-AYGL007C-A 87 nt-2.38□□□□□ -2.79
ECM33P38248 tV(UAC)QtV(UAC)Q 76 nt-2.38□□□□□ -2.79
ECM33P38248 YNL103W-AYNL103W-A 90 nt-2.38□□□□□ -2.79
ECM33P38248 snR61snR61 90 nt-2.39□□□□□ -2.79
ECM33P38248 snR73snR73 106 nt-2.39□□□□□ -2.79
Retrieved 100 of 7,029 protein–RNA pairs in 24.4 ms