Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 FIG2YCR089W 4830 nt2.12□□□□□ -2.07
RTG3P38165 TMA7YLR262C-A 195 nt2.12□□□□□ -2.07
RTG3P38165 PMD1YER132C 5262 nt2.11□□□□□ -2.07
RTG3P38165 CLU1YMR012W 3834 nt2.11□□□□□ -2.07
RTG3P38165 YMR045CYMR045C 5268 nt2.09□□□□□ -2.08
RTG3P38165 BST1YFL025C 3090 nt2.09□□□□□ -2.08
RTG3P38165 YER090C-AYER090C-A 90 nt2.08□□□□□ -2.08
RTG3P38165 YOR093CYOR093C 4947 nt2.06□□□□□ -2.08
RTG3P38165 LAA1YJL207C 6045 nt2.03□□□□□ -2.08
RTG3P38165 NUP192YJL039C 5052 nt2.01□□□□□ -2.09
RTG3P38165 DNF3YMR162C 4971 nt1.99□□□□□ -2.09
RTG3P38165 YGR130CYGR130C 2451 nt1.96□□□□□ -2.1
RTG3P38165 YOR376W-AYOR376W-A 156 nt1.94□□□□□ -2.1
RTG3P38165 YDL114W-AYDL114W-A 114 nt1.93□□□□□ -2.1
RTG3P38165 YMR247W-AYMR247W-A 144 nt1.93□□□□□ -2.1
RTG3P38165 MLP2YIL149C 5040 nt1.93□□□□□ -2.1
RTG3P38165 SPC110YDR356W 2835 nt1.91□□□□□ -2.1
RTG3P38165 snR67snR67 82 nt1.91□□□□□ -2.1
RTG3P38165 YNL054W-BYNL054W-B 5250 nt1.89□□□□□ -2.11
RTG3P38165 tT(UGU)HtT(UGU)H 72 nt1.88□□□□□ -2.11
RTG3P38165 VPS15YBR097W 4365 nt1.87□□□□□ -2.11
RTG3P38165 SPT7YBR081C 3999 nt1.87□□□□□ -2.11
RTG3P38165 YNL284C-BYNL284C-B 5268 nt1.86□□□□□ -2.11
RTG3P38165 MEC1YBR136W 7107 nt1.82□□□□□ -2.12
RTG3P38165 tV(UAC)QtV(UAC)Q 76 nt1.82□□□□□ -2.12
RTG3P38165 tQ(UUG)E2tQ(UUG)E2 72 nt1.8□□□□□ -2.12
RTG3P38165 YKL106C-AYKL106C-A 120 nt1.79□□□□□ -2.12
RTG3P38165 VAM6YDL077C 3150 nt1.74□□□□□ -2.13
RTG3P38165 YMR160WYMR160W 2451 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)E1tH(GUG)E1 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)E2tH(GUG)E2 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)G1tH(GUG)G1 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)G2tH(GUG)G2 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)HtH(GUG)H 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)KtH(GUG)K 72 nt1.71□□□□□ -2.14
RTG3P38165 tH(GUG)MtH(GUG)M 72 nt1.71□□□□□ -2.14
RTG3P38165 SSK2YNR031C 4740 nt1.71□□□□□ -2.14
RTG3P38165 CCH1YGR217W 6120 nt1.69□□□□□ -2.14
RTG3P38165 snR40snR40 97 nt1.67□□□□□ -2.14
RTG3P38165 IRA1YBR140C 9279 nt1.66□□□□□ -2.14
RTG3P38165 YOR192C-BYOR192C-B 5313 nt1.64□□□□□ -2.15
RTG3P38165 YPR117WYPR117W 7470 nt1.62□□□□□ -2.15
RTG3P38165 IML1YJR138W 4755 nt1.57□□□□□ -2.16
RTG3P38165 RKR1YMR247C 4689 nt1.57□□□□□ -2.16
RTG3P38165 HKR1YDR420W 5409 nt1.55□□□□□ -2.16
RTG3P38165 LTE1YAL024C 4308 nt1.49□□□□□ -2.17
RTG3P38165 BUD3YCL014W 4911 nt1.48□□□□□ -2.17
RTG3P38165 SCC2YDR180W 4482 nt1.46□□□□□ -2.18
RTG3P38165 BEM2YER155C 6504 nt1.45□□□□□ -2.18
RTG3P38165 tV(UAC)BtV(UAC)B 74 nt1.44□□□□□ -2.18
RTG3P38165 tV(UAC)DtV(UAC)D 74 nt1.44□□□□□ -2.18
RTG3P38165 MYO1YHR023W 5787 nt1.42□□□□□ -2.18
RTG3P38165 YBL100W-BYBL100W-B 5313 nt1.42□□□□□ -2.18
RTG3P38165 PAU24YBR301W 363 nt1.4□□□□□ -2.19
RTG3P38165 snR77snR77 88 nt1.36□□□□□ -2.19
RTG3P38165 YOR316C-AYOR316C-A 210 nt1.36□□□□□ -2.19
RTG3P38165 YML100W-AYML100W-A 174 nt1.26□□□□□ -2.21
RTG3P38165 DOP1YDR141C 5097 nt1.26□□□□□ -2.21
RTG3P38165 MLP1YKR095W 5628 nt1.25□□□□□ -2.21
RTG3P38165 YJR029WYJR029W 5268 nt1.24□□□□□ -2.21
RTG3P38165 SBH2YER019C-A 267 nt1.23□□□□□ -2.21
RTG3P38165 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
RTG3P38165 YOR186C-AYOR186C-A 210 nt1.14□□□□□ -2.23
RTG3P38165 EMT1tM(CAU)D 73 nt1.12□□□□□ -2.23
RTG3P38165 EMT5tM(CAU)J1 73 nt1.12□□□□□ -2.23
RTG3P38165 EMT3tM(CAU)J2 73 nt1.12□□□□□ -2.23
RTG3P38165 EMT4tM(CAU)M 73 nt1.12□□□□□ -2.23
RTG3P38165 EMT2tM(CAU)O2 73 nt1.12□□□□□ -2.23
RTG3P38165 IQG1YPL242C 4488 nt1.11□□□□□ -2.23
RTG3P38165 SOV1YMR066W 2697 nt1.05□□□□□ -2.24
RTG3P38165 tT(AGU)BtT(AGU)B 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)CtT(AGU)C 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)DtT(AGU)D 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)HtT(AGU)H 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)I1tT(AGU)I1 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)I2tT(AGU)I2 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)JtT(AGU)J 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)N1tT(AGU)N1 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)N2tT(AGU)N2 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)O1tT(AGU)O1 73 nt0.97□□□□□ -2.25
RTG3P38165 tT(AGU)O2tT(AGU)O2 73 nt0.97□□□□□ -2.25
RTG3P38165 UTP20YBL004W 7482 nt0.96□□□□□ -2.26
RTG3P38165 tF(GAA)BtF(GAA)B 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)FtF(GAA)F 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)GtF(GAA)G 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)H1tF(GAA)H1 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)H2tF(GAA)H2 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)MtF(GAA)M 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)P1tF(GAA)P1 73 nt0.94□□□□□ -2.26
RTG3P38165 tF(GAA)P2tF(GAA)P2 73 nt0.94□□□□□ -2.26
RTG3P38165 ESP1YGR098C 4893 nt0.93□□□□□ -2.26
RTG3P38165 THO2YNL139C 4794 nt0.85□□□□□ -2.27
RTG3P38165 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
RTG3P38165 YJL113WYJL113W 4647 nt0.84□□□□□ -2.28
RTG3P38165 FMP27YLR454W 7887 nt0.83□□□□□ -2.28
RTG3P38165 PAU9YBL108C-A 129 nt0.81□□□□□ -2.28
RTG3P38165 YOL014WYOL014W 375 nt0.77□□□□□ -2.29
RTG3P38165 UTP10YJL109C 5310 nt0.74□□□□□ -2.29
RTG3P38165 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
RTG3P38165 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms