Protein–RNA interactions for Protein: P37292

SHM1, Serine hydroxymethyltransferase, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHM1P37292 SKI7YOR076C 2244 nt1.55□□□□□ -2.16
SHM1P37292 SPC110YDR356W 2835 nt1.54□□□□□ -2.16
SHM1P37292 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
SHM1P37292 BUL2YML111W 2763 nt1.53□□□□□ -2.16
SHM1P37292 NIP1YMR309C 2439 nt1.52□□□□□ -2.17
SHM1P37292 VPS15YBR097W 4365 nt1.52□□□□□ -2.17
SHM1P37292 PAU12YGR294W 363 nt1.52□□□□□ -2.17
SHM1P37292 CDC39YCR093W 6327 nt1.51□□□□□ -2.17
SHM1P37292 tQ(UUG)QtQ(UUG)Q 76 nt1.51□□□□□ -2.17
SHM1P37292 NST1YNL091W 3723 nt1.5□□□□□ -2.17
SHM1P37292 CCH1YGR217W 6120 nt1.49□□□□□ -2.17
SHM1P37292 SSK2YNR031C 4740 nt1.49□□□□□ -2.17
SHM1P37292 snR75snR75 89 nt1.48□□□□□ -2.17
SHM1P37292 YDL159W-AYDL159W-A 132 nt1.48□□□□□ -2.17
SHM1P37292 YER078W-AYER078W-A 165 nt1.48□□□□□ -2.17
SHM1P37292 snR38snR38 95 nt1.47□□□□□ -2.17
SHM1P37292 AI1Q0050 2505 nt1.44□□□□□ -2.18
SHM1P37292 YGR130CYGR130C 2451 nt1.44□□□□□ -2.18
SHM1P37292 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
SHM1P37292 YGR122C-AYGR122C-A 129 nt1.42□□□□□ -2.18
SHM1P37292 YPL060C-AYPL060C-A 3315 nt1.4□□□□□ -2.18
SHM1P37292 SPT7YBR081C 3999 nt1.4□□□□□ -2.19
SHM1P37292 NUP192YJL039C 5052 nt1.36□□□□□ -2.19
SHM1P37292 BEM2YER155C 6504 nt1.35□□□□□ -2.19
SHM1P37292 tH(GUG)E1tH(GUG)E1 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)E2tH(GUG)E2 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)G1tH(GUG)G1 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)G2tH(GUG)G2 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)HtH(GUG)H 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)KtH(GUG)K 72 nt1.33□□□□□ -2.2
SHM1P37292 tH(GUG)MtH(GUG)M 72 nt1.33□□□□□ -2.2
SHM1P37292 YER090C-AYER090C-A 90 nt1.33□□□□□ -2.2
SHM1P37292 MLP2YIL149C 5040 nt1.24□□□□□ -2.21
SHM1P37292 snR67snR67 82 nt1.2□□□□□ -2.22
SHM1P37292 YOR192C-BYOR192C-B 5313 nt1.2□□□□□ -2.22
SHM1P37292 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
SHM1P37292 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
SHM1P37292 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
SHM1P37292 RKR1YMR247C 4689 nt1.16□□□□□ -2.22
SHM1P37292 LTE1YAL024C 4308 nt1.15□□□□□ -2.23
SHM1P37292 PET111YMR257C 2403 nt1.15□□□□□ -2.23
SHM1P37292 VAM6YDL077C 3150 nt1.14□□□□□ -2.23
SHM1P37292 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
SHM1P37292 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
SHM1P37292 IML1YJR138W 4755 nt1.09□□□□□ -2.24
SHM1P37292 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
SHM1P37292 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
SHM1P37292 PAU24YBR301W 363 nt1.03□□□□□ -2.24
SHM1P37292 YNL054W-BYNL054W-B 5250 nt1.03□□□□□ -2.24
SHM1P37292 YKL106C-AYKL106C-A 120 nt1.01□□□□□ -2.25
SHM1P37292 MLP1YKR095W 5628 nt1□□□□□ -2.25
SHM1P37292 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
SHM1P37292 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
SHM1P37292 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
SHM1P37292 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
SHM1P37292 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
SHM1P37292 YDL114W-AYDL114W-A 114 nt0.97□□□□□ -2.25
SHM1P37292 YMR160WYMR160W 2451 nt0.97□□□□□ -2.25
SHM1P37292 YBL100W-BYBL100W-B 5313 nt0.92□□□□□ -2.26
SHM1P37292 YOR186C-AYOR186C-A 210 nt0.87□□□□□ -2.27
SHM1P37292 tV(UAC)QtV(UAC)Q 76 nt0.81□□□□□ -2.28
SHM1P37292 MYO1YHR023W 5787 nt0.81□□□□□ -2.28
SHM1P37292 tT(AGU)BtT(AGU)B 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)CtT(AGU)C 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)DtT(AGU)D 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)HtT(AGU)H 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)I1tT(AGU)I1 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)I2tT(AGU)I2 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)JtT(AGU)J 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)N1tT(AGU)N1 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)N2tT(AGU)N2 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)O1tT(AGU)O1 73 nt0.78□□□□□ -2.28
SHM1P37292 tT(AGU)O2tT(AGU)O2 73 nt0.78□□□□□ -2.28
SHM1P37292 YML100W-AYML100W-A 174 nt0.74□□□□□ -2.29
SHM1P37292 YOR376W-AYOR376W-A 156 nt0.74□□□□□ -2.29
SHM1P37292 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
SHM1P37292 IQG1YPL242C 4488 nt0.73□□□□□ -2.29
SHM1P37292 UTP20YBL004W 7482 nt0.7□□□□□ -2.3
SHM1P37292 FMP27YLR454W 7887 nt0.65□□□□□ -2.31
SHM1P37292 YOR316C-AYOR316C-A 210 nt0.65□□□□□ -2.31
SHM1P37292 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SHM1P37292 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SHM1P37292 snR77snR77 88 nt0.6□□□□□ -2.31
SHM1P37292 SBH2YER019C-A 267 nt0.59□□□□□ -2.31
SHM1P37292 snR40snR40 97 nt0.57□□□□□ -2.32
SHM1P37292 PAU9YBL108C-A 129 nt0.54□□□□□ -2.32
SHM1P37292 snR128snR128 126 nt0.52□□□□□ -2.33
SHM1P37292 SOV1YMR066W 2697 nt0.51□□□□□ -2.33
SHM1P37292 ESP1YGR098C 4893 nt0.5□□□□□ -2.33
SHM1P37292 THO2YNL139C 4794 nt0.48□□□□□ -2.33
SHM1P37292 tF(GAA)BtF(GAA)B 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)FtF(GAA)F 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)GtF(GAA)G 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)H1tF(GAA)H1 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)H2tF(GAA)H2 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)MtF(GAA)M 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)P1tF(GAA)P1 73 nt0.46□□□□□ -2.34
SHM1P37292 tF(GAA)P2tF(GAA)P2 73 nt0.46□□□□□ -2.34
SHM1P37292 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
SHM1P37292 YKL145W-AYKL145W-A 93 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms