Protein–RNA interactions for Protein: P32366

VMA6, V-type proton ATPase subunit d, yeast

Known RBP Predictions only

Length 345 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	P32366	tF(GAA)Q	tF(GAA)Q	75 nt		-1.25	□□□□□ -2.61
VMA6	P32366	YEL014C	YEL014C	306 nt		-1.27	□□□□□ -2.61
VMA6	P32366	YKL118W	YKL118W	312 nt		-1.27	□□□□□ -2.61
VMA6	P32366	RDS3	YPR094W	324 nt		-1.27	□□□□□ -2.61
VMA6	P32366	YER181C	YER181C	324 nt		-1.28	□□□□□ -2.61
VMA6	P32366	YGR146C-A	YGR146C-A	162 nt		-1.29	□□□□□ -2.62
VMA6	P32366	YNL266W	YNL266W	420 nt		-1.29	□□□□□ -2.62
VMA6	P32366	YNL277W-A	YNL277W-A	189 nt		-1.31	□□□□□ -2.62
VMA6	P32366	YNR077C	YNR077C	255 nt		-1.31	□□□□□ -2.62
VMA6	P32366	YPR012W	YPR012W	255 nt		-1.31	□□□□□ -2.62
VMA6	P32366	snR50	snR50	90 nt		-1.31	□□□□□ -2.62
VMA6	P32366	tP(UGG)Q	tP(UGG)Q	72 nt		-1.32	□□□□□ -2.62
VMA6	P32366	PMP2	YEL017C-A	132 nt		-1.33	□□□□□ -2.62
VMA6	P32366	YBR131C-A	YBR131C-A	90 nt		-1.33	□□□□□ -2.62
VMA6	P32366	snR39B	snR39B	96 nt		-1.33	□□□□□ -2.62
VMA6	P32366	GIM4	YEL003W	336 nt		-1.36	□□□□□ -2.63
VMA6	P32366	YFL019C	YFL019C	354 nt		-1.37	□□□□□ -2.63
VMA6	P32366	snR55	snR55	98 nt		-1.4	□□□□□ -2.63
VMA6	P32366	JLP2	YMR132C	627 nt		-1.41	□□□□□ -2.64
VMA6	P32366	YOR329W-A	YOR329W-A	210 nt		-1.45	□□□□□ -2.64
VMA6	P32366	snR67	snR67	82 nt		-1.49	□□□□□ -2.65
VMA6	P32366	tD(GUC)Q	tD(GUC)Q	75 nt		-1.49	□□□□□ -2.65
VMA6	P32366	YNL097C-B	YNL097C-B	123 nt		-1.49	□□□□□ -2.65
VMA6	P32366	Q0144	Q0144	330 nt		-1.54	□□□□□ -2.66
VMA6	P32366	YLR286W-A	YLR286W-A	135 nt		-1.54	□□□□□ -2.66
VMA6	P32366	SKI7	YOR076C	2244 nt		-1.56	□□□□□ -2.66
VMA6	P32366	YOL155W-A	YOL155W-A	135 nt		-1.58	□□□□□ -2.66
VMA6	P32366	YNL205C	YNL205C	423 nt		-1.6	□□□□□ -2.67
VMA6	P32366	YBR178W	YBR178W	375 nt		-1.62	□□□□□ -2.67
VMA6	P32366	YDL159C-B	YDL159C-B	177 nt		-1.63	□□□□□ -2.67
VMA6	P32366	tY(GUA)Q	tY(GUA)Q	84 nt		-1.64	□□□□□ -2.67
VMA6	P32366	snR48	snR48	113 nt		-1.64	□□□□□ -2.67
VMA6	P32366	YOR302W	YOR302W	78 nt		-1.66	□□□□□ -2.68
VMA6	P32366	snR65	snR65	100 nt		-1.67	□□□□□ -2.68
VMA6	P32366	YPL152W-A	YPL152W-A	99 nt		-1.69	□□□□□ -2.68
VMA6	P32366	YOR102W	YOR102W	351 nt		-1.74	□□□□□ -2.69
VMA6	P32366	YGL188C-A	YGL188C-A	141 nt		-1.77	□□□□□ -2.69
VMA6	P32366	tL(UAA)Q	tL(UAA)Q	85 nt		-1.78	□□□□□ -2.69
VMA6	P32366	CDC65	tQ(CUG)M	72 nt		-1.78	□□□□□ -2.69
VMA6	P32366	YML054C-A	YML054C-A	159 nt		-1.78	□□□□□ -2.69
VMA6	P32366	snR77	snR77	88 nt		-1.81	□□□□□ -2.7
VMA6	P32366	YLR342W-A	YLR342W-A	174 nt		-1.81	□□□□□ -2.7
VMA6	P32366	snR52	snR52	92 nt		-1.82	□□□□□ -2.7
VMA6	P32366	YLR299C-A	YLR299C-A	93 nt		-1.85	□□□□□ -2.71
VMA6	P32366	YHR175W-A	YHR175W-A	150 nt		-1.86	□□□□□ -2.71
VMA6	P32366	YGR240C-A	YGR240C-A	201 nt		-1.89	□□□□□ -2.71
VMA6	P32366	YHL015W-A	YHL015W-A	84 nt		-1.9	□□□□□ -2.71
VMA6	P32366	YBR196C-A	YBR196C-A	150 nt		-1.91	□□□□□ -2.72
VMA6	P32366	snR81	snR81	201 nt		-1.94	□□□□□ -2.72
VMA6	P32366	YMR315W-A	YMR315W-A	108 nt		-1.97	□□□□□ -2.72
VMA6	P32366	tR(ACG)Q2	tR(ACG)Q2	74 nt		-1.99	□□□□□ -2.73
VMA6	P32366	snR56	snR56	88 nt		-2.02	□□□□□ -2.73
VMA6	P32366	YOR231C-A	YOR231C-A	201 nt		-2.04	□□□□□ -2.74
VMA6	P32366	snR80	snR80	171 nt		-2.05	□□□□□ -2.74
VMA6	P32366	YOR376W-A	YOR376W-A	156 nt		-2.09	□□□□□ -2.74
VMA6	P32366	YBR126W-B	YBR126W-B	144 nt		-2.12	□□□□□ -2.75
VMA6	P32366	YNL198C	YNL198C	303 nt		-2.13	□□□□□ -2.75
VMA6	P32366	YHR180C-B	YHR180C-B	105 nt		-2.17	□□□□□ -2.76
VMA6	P32366	YDR406W-A	YDR406W-A	246 nt		-2.23	□□□□□ -2.77
VMA6	P32366	YDR524W-C	YDR524W-C	90 nt		-2.26	□□□□□ -2.77
VMA6	P32366	YJL150W	YJL150W	303 nt		-2.27	□□□□□ -2.77
VMA6	P32366	SOM1	YEL059C-A	225 nt		-2.28	□□□□□ -2.77
VMA6	P32366	YOR309C	YOR309C	381 nt		-2.28	□□□□□ -2.77
VMA6	P32366	YOR316C-A	YOR316C-A	210 nt		-2.35	□□□□□ -2.79
VMA6	P32366	YKL106C-A	YKL106C-A	120 nt		-2.37	□□□□□ -2.79
VMA6	P32366	YCR095W-A	YCR095W-A	159 nt		-2.39	□□□□□ -2.79
VMA6	P32366	YBL053W	YBL053W	375 nt		-2.4	□□□□□ -2.79
VMA6	P32366	YDR543C	YDR543C	300 nt		-2.52	□□□□□ -2.81
VMA6	P32366	YBR109W-A	YBR109W-A	225 nt		-2.52	□□□□□ -2.81
VMA6	P32366	YBR296C-A	YBR296C-A	120 nt		-2.53	□□□□□ -2.81
VMA6	P32366	RPL41A	YDL184C	78 nt		-2.55	□□□□□ -2.82
VMA6	P32366	YMR046W-A	YMR046W-A	129 nt		-2.63	□□□□□ -2.83
VMA6	P32366	YGR151C	YGR151C	336 nt		-2.66	□□□□□ -2.84
VMA6	P32366	YOL083C-A	YOL083C-A	141 nt		-2.66	□□□□□ -2.84
VMA6	P32366	snR6	snR6	112 nt		-2.72	□□□□□ -2.84
VMA6	P32366	snR38	snR38	95 nt		-2.72	□□□□□ -2.84
VMA6	P32366	YBL071C-B	YBL071C-B	99 nt		-2.73	□□□□□ -2.85
VMA6	P32366	YOL164W-A	YOL164W-A	183 nt		-2.78	□□□□□ -2.85
VMA6	P32366	SPG3	YDR504C	384 nt		-2.84	□□□□□ -2.86
VMA6	P32366	YOL166W-A	YOL166W-A	156 nt		-2.86	□□□□□ -2.87
VMA6	P32366	YAL037C-A	YAL037C-A	93 nt		-2.87	□□□□□ -2.87
VMA6	P32366	YOR335W-A	YOR335W-A	81 nt		-2.87	□□□□□ -2.87
VMA6	P32366	snR73	snR73	106 nt		-2.91	□□□□□ -2.88
VMA6	P32366	YCL001W-B	YCL001W-B	255 nt		-2.91	□□□□□ -2.88
VMA6	P32366	snR47	snR47	99 nt		-2.92	□□□□□ -2.88
VMA6	P32366	Q0142	Q0142	177 nt		-2.95	□□□□□ -2.88
VMA6	P32366	YBL100W-C	YBL100W-C	120 nt		-2.95	□□□□□ -2.88
VMA6	P32366	tM(CAU)Q1	tM(CAU)Q1	76 nt		-2.99	□□□□□ -2.89
VMA6	P32366	RPL41B	YDL133C-A	78 nt		-3.04	□□□□□ -2.9
VMA6	P32366	YLR466C-B	YLR466C-B	117 nt		-3.08	□□□□□ -2.9
VMA6	P32366	YNL337W	YNL337W	255 nt		-3.21	□□□□□ -2.92
VMA6	P32366	YKL225W	YKL225W	348 nt		-3.22	□□□□□ -2.92
VMA6	P32366	YNL338W	YNL338W	159 nt		-3.22	□□□□□ -2.92
VMA6	P32366	tV(UAC)Q	tV(UAC)Q	76 nt		-3.24	□□□□□ -2.93
VMA6	P32366	YDR524C-A	YDR524C-A	120 nt		-3.25	□□□□□ -2.93
VMA6	P32366	YDL114W-A	YDL114W-A	114 nt		-3.28	□□□□□ -2.93
VMA6	P32366	tS(GCU)Q1	tS(GCU)Q1	86 nt		-3.28	□□□□□ -2.93
VMA6	P32366	snR85	snR85	171 nt		-3.35	□□□□□ -2.95
VMA6	P32366	YGL041C-B	YGL041C-B	183 nt		-3.56	□□□□□ -2.98
VMA6	P32366	YDR034C-A	YDR034C-A	177 nt		-3.59	□□□□□ -2.98

Retrieved 100 of 7,029 protein–RNA pairs in 66.5 ms