Protein–RNA interactions for Protein: P25591

VAC17, vacuole-related protein 17, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAC17P25591 YPL060C-AYPL060C-A 3315 nt1.67□□□□□ -2.14
VAC17P25591 YGR122C-AYGR122C-A 129 nt1.66□□□□□ -2.14
VAC17P25591 VPS15YBR097W 4365 nt1.64□□□□□ -2.15
VAC17P25591 FIG2YCR089W 4830 nt1.64□□□□□ -2.15
VAC17P25591 FYV8YGR196C 2454 nt1.64□□□□□ -2.15
VAC17P25591 tQ(UUG)QtQ(UUG)Q 76 nt1.64□□□□□ -2.15
VAC17P25591 CLU1YMR012W 3834 nt1.64□□□□□ -2.15
VAC17P25591 LAA1YJL207C 6045 nt1.6□□□□□ -2.15
VAC17P25591 YGR130CYGR130C 2451 nt1.57□□□□□ -2.16
VAC17P25591 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
VAC17P25591 tT(UGU)HtT(UGU)H 72 nt1.53□□□□□ -2.16
VAC17P25591 CAT8YMR280C 4302 nt1.53□□□□□ -2.16
VAC17P25591 SPT7YBR081C 3999 nt1.52□□□□□ -2.17
VAC17P25591 YMR247W-AYMR247W-A 144 nt1.51□□□□□ -2.17
VAC17P25591 YER090C-AYER090C-A 90 nt1.49□□□□□ -2.17
VAC17P25591 IRA1YBR140C 9279 nt1.48□□□□□ -2.17
VAC17P25591 tQ(UUG)E2tQ(UUG)E2 72 nt1.47□□□□□ -2.17
VAC17P25591 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
VAC17P25591 SSK2YNR031C 4740 nt1.47□□□□□ -2.17
VAC17P25591 SPC110YDR356W 2835 nt1.43□□□□□ -2.18
VAC17P25591 YNL284C-BYNL284C-B 5268 nt1.41□□□□□ -2.18
VAC17P25591 PET111YMR257C 2403 nt1.38□□□□□ -2.19
VAC17P25591 MEC1YBR136W 7107 nt1.37□□□□□ -2.19
VAC17P25591 HKR1YDR420W 5409 nt1.36□□□□□ -2.19
VAC17P25591 YOR192C-BYOR192C-B 5313 nt1.34□□□□□ -2.19
VAC17P25591 snR67snR67 82 nt1.33□□□□□ -2.2
VAC17P25591 RKR1YMR247C 4689 nt1.33□□□□□ -2.2
VAC17P25591 YNL054W-BYNL054W-B 5250 nt1.32□□□□□ -2.2
VAC17P25591 tH(GUG)E1tH(GUG)E1 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)E2tH(GUG)E2 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)G1tH(GUG)G1 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)G2tH(GUG)G2 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)HtH(GUG)H 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)KtH(GUG)K 72 nt1.3□□□□□ -2.2
VAC17P25591 tH(GUG)MtH(GUG)M 72 nt1.3□□□□□ -2.2
VAC17P25591 VAM6YDL077C 3150 nt1.29□□□□□ -2.2
VAC17P25591 YPR117WYPR117W 7470 nt1.25□□□□□ -2.21
VAC17P25591 MLP2YIL149C 5040 nt1.22□□□□□ -2.21
VAC17P25591 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
VAC17P25591 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
VAC17P25591 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
VAC17P25591 BUD3YCL014W 4911 nt1.21□□□□□ -2.22
VAC17P25591 MYO1YHR023W 5787 nt1.19□□□□□ -2.22
VAC17P25591 IML1YJR138W 4755 nt1.16□□□□□ -2.22
VAC17P25591 LTE1YAL024C 4308 nt1.15□□□□□ -2.22
VAC17P25591 YKL106C-AYKL106C-A 120 nt1.15□□□□□ -2.23
VAC17P25591 YDL114W-AYDL114W-A 114 nt1.14□□□□□ -2.23
VAC17P25591 PAU24YBR301W 363 nt1.13□□□□□ -2.23
VAC17P25591 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
VAC17P25591 YPR137C-BYPR137C-B 5268 nt1.12□□□□□ -2.23
VAC17P25591 YMR160WYMR160W 2451 nt1.11□□□□□ -2.23
VAC17P25591 YBL100W-BYBL100W-B 5313 nt1.05□□□□□ -2.24
VAC17P25591 BEM2YER155C 6504 nt1.03□□□□□ -2.24
VAC17P25591 tV(UAC)QtV(UAC)Q 76 nt1.02□□□□□ -2.25
VAC17P25591 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
VAC17P25591 MLP1YKR095W 5628 nt0.99□□□□□ -2.25
VAC17P25591 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
VAC17P25591 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
VAC17P25591 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
VAC17P25591 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
VAC17P25591 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
VAC17P25591 YOR376W-AYOR376W-A 156 nt0.96□□□□□ -2.26
VAC17P25591 tF(GAA)BtF(GAA)B 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)FtF(GAA)F 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)GtF(GAA)G 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)H1tF(GAA)H1 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)H2tF(GAA)H2 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)MtF(GAA)M 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)P1tF(GAA)P1 73 nt0.89□□□□□ -2.27
VAC17P25591 tF(GAA)P2tF(GAA)P2 73 nt0.89□□□□□ -2.27
VAC17P25591 YOR186C-AYOR186C-A 210 nt0.89□□□□□ -2.27
VAC17P25591 YML100W-AYML100W-A 174 nt0.86□□□□□ -2.27
VAC17P25591 YOR316C-AYOR316C-A 210 nt0.77□□□□□ -2.29
VAC17P25591 YOL014WYOL014W 375 nt0.76□□□□□ -2.29
VAC17P25591 snR40snR40 97 nt0.76□□□□□ -2.29
VAC17P25591 UTP20YBL004W 7482 nt0.76□□□□□ -2.29
VAC17P25591 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
VAC17P25591 snR77snR77 88 nt0.74□□□□□ -2.29
VAC17P25591 IQG1YPL242C 4488 nt0.72□□□□□ -2.29
VAC17P25591 YKL145W-AYKL145W-A 93 nt0.72□□□□□ -2.29
VAC17P25591 UTP10YJL109C 5310 nt0.69□□□□□ -2.3
VAC17P25591 SBH2YER019C-A 267 nt0.69□□□□□ -2.3
VAC17P25591 tT(AGU)BtT(AGU)B 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)CtT(AGU)C 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)DtT(AGU)D 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)HtT(AGU)H 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)I1tT(AGU)I1 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)I2tT(AGU)I2 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)JtT(AGU)J 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)N1tT(AGU)N1 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)N2tT(AGU)N2 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)O1tT(AGU)O1 73 nt0.66□□□□□ -2.3
VAC17P25591 tT(AGU)O2tT(AGU)O2 73 nt0.66□□□□□ -2.3
VAC17P25591 THO2YNL139C 4794 nt0.65□□□□□ -2.3
VAC17P25591 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
VAC17P25591 SOV1YMR066W 2697 nt0.61□□□□□ -2.31
VAC17P25591 PAU9YBL108C-A 129 nt0.58□□□□□ -2.32
VAC17P25591 ESP1YGR098C 4893 nt0.55□□□□□ -2.32
VAC17P25591 snR128snR128 126 nt0.55□□□□□ -2.32
VAC17P25591 FMP27YLR454W 7887 nt0.45□□□□□ -2.34
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms