Protein–RNA interactions for Protein: P10080

SBP1, Single-stranded nucleic acid-binding protein, yeastyeast

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SBP1P10080 PAU12YGR294W 363 nt1.68□□□□□ -2.14
SBP1P10080 CDC25YLR310C 4770 nt1.68□□□□□ -2.14
SBP1P10080 PMD1YER132C 5262 nt1.68□□□□□ -2.14
SBP1P10080 MEC1YBR136W 7107 nt1.67□□□□□ -2.14
SBP1P10080 CFT1YDR301W 4074 nt1.67□□□□□ -2.14
SBP1P10080 SXM1YDR395W 2835 nt1.67□□□□□ -2.14
SBP1P10080 snR40snR40 97 nt1.66□□□□□ -2.14
SBP1P10080 CLU1YMR012W 3834 nt1.65□□□□□ -2.14
SBP1P10080 BRR2YER172C 6492 nt1.64□□□□□ -2.15
SBP1P10080 NUP188YML103C 4968 nt1.64□□□□□ -2.15
SBP1P10080 YDL114W-AYDL114W-A 114 nt1.64□□□□□ -2.15
SBP1P10080 YLR399W-AYLR399W-A 105 nt1.64□□□□□ -2.15
SBP1P10080 GEA2YEL022W 4380 nt1.64□□□□□ -2.15
SBP1P10080 YJL077W-AYJL077W-A 87 nt1.6□□□□□ -2.15
SBP1P10080 CAT8YMR280C 4302 nt1.57□□□□□ -2.16
SBP1P10080 tQ(UUG)E2tQ(UUG)E2 72 nt1.57□□□□□ -2.16
SBP1P10080 HUG1YML058W-A 207 nt1.57□□□□□ -2.16
SBP1P10080 YER090C-AYER090C-A 90 nt1.55□□□□□ -2.16
SBP1P10080 CCH1YGR217W 6120 nt1.55□□□□□ -2.16
SBP1P10080 CDC39YCR093W 6327 nt1.54□□□□□ -2.16
SBP1P10080 FYV8YGR196C 2454 nt1.52□□□□□ -2.17
SBP1P10080 MYO1YHR023W 5787 nt1.52□□□□□ -2.17
SBP1P10080 tQ(UUG)QtQ(UUG)Q 76 nt1.5□□□□□ -2.17
SBP1P10080 LAA1YJL207C 6045 nt1.48□□□□□ -2.17
SBP1P10080 SSK2YNR031C 4740 nt1.48□□□□□ -2.17
SBP1P10080 YLL006W-AYLL006W-A 177 nt1.45□□□□□ -2.18
SBP1P10080 YMR160WYMR160W 2451 nt1.45□□□□□ -2.18
SBP1P10080 YGR130CYGR130C 2451 nt1.44□□□□□ -2.18
SBP1P10080 SPT7YBR081C 3999 nt1.41□□□□□ -2.18
SBP1P10080 YKL106C-AYKL106C-A 120 nt1.41□□□□□ -2.18
SBP1P10080 HKR1YDR420W 5409 nt1.4□□□□□ -2.19
SBP1P10080 snR67snR67 82 nt1.39□□□□□ -2.19
SBP1P10080 IML1YJR138W 4755 nt1.35□□□□□ -2.19
SBP1P10080 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
SBP1P10080 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
SBP1P10080 YPR117WYPR117W 7470 nt1.34□□□□□ -2.2
SBP1P10080 YNL284C-BYNL284C-B 5268 nt1.31□□□□□ -2.2
SBP1P10080 SOV1YMR066W 2697 nt1.3□□□□□ -2.2
SBP1P10080 VAM6YDL077C 3150 nt1.3□□□□□ -2.2
SBP1P10080 tV(UAC)BtV(UAC)B 74 nt1.26□□□□□ -2.21
SBP1P10080 tV(UAC)DtV(UAC)D 74 nt1.26□□□□□ -2.21
SBP1P10080 snR77snR77 88 nt1.23□□□□□ -2.21
SBP1P10080 MLP2YIL149C 5040 nt1.21□□□□□ -2.22
SBP1P10080 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
SBP1P10080 SCC2YDR180W 4482 nt1.17□□□□□ -2.22
SBP1P10080 YOR192C-BYOR192C-B 5313 nt1.16□□□□□ -2.22
SBP1P10080 YOR316C-AYOR316C-A 210 nt1.16□□□□□ -2.22
SBP1P10080 RKR1YMR247C 4689 nt1.13□□□□□ -2.23
SBP1P10080 BEM2YER155C 6504 nt1.13□□□□□ -2.23
SBP1P10080 YBL100W-BYBL100W-B 5313 nt1.09□□□□□ -2.24
SBP1P10080 SBH2YER019C-A 267 nt1.05□□□□□ -2.24
SBP1P10080 LTE1YAL024C 4308 nt1.04□□□□□ -2.24
SBP1P10080 YML100W-AYML100W-A 174 nt1□□□□□ -2.25
SBP1P10080 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
SBP1P10080 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
SBP1P10080 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
SBP1P10080 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
SBP1P10080 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
SBP1P10080 PAU24YBR301W 363 nt0.98□□□□□ -2.25
SBP1P10080 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
SBP1P10080 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
SBP1P10080 UTP20YBL004W 7482 nt0.95□□□□□ -2.26
SBP1P10080 tF(GAA)BtF(GAA)B 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)FtF(GAA)F 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)GtF(GAA)G 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)H1tF(GAA)H1 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)H2tF(GAA)H2 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)MtF(GAA)M 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)P1tF(GAA)P1 73 nt0.92□□□□□ -2.26
SBP1P10080 tF(GAA)P2tF(GAA)P2 73 nt0.92□□□□□ -2.26
SBP1P10080 DOP1YDR141C 5097 nt0.91□□□□□ -2.26
SBP1P10080 YJL113WYJL113W 4647 nt0.88□□□□□ -2.27
SBP1P10080 ESP1YGR098C 4893 nt0.84□□□□□ -2.27
SBP1P10080 MLP1YKR095W 5628 nt0.83□□□□□ -2.28
SBP1P10080 THO2YNL139C 4794 nt0.83□□□□□ -2.28
SBP1P10080 tC(GCA)QtC(GCA)Q 76 nt0.81□□□□□ -2.28
SBP1P10080 FMP27YLR454W 7887 nt0.79□□□□□ -2.28
SBP1P10080 YPR159C-AYPR159C-A 102 nt0.78□□□□□ -2.28
SBP1P10080 YOR335W-AYOR335W-A 81 nt0.76□□□□□ -2.29
SBP1P10080 snR6snR6 112 nt0.75□□□□□ -2.29
SBP1P10080 YOL014WYOL014W 375 nt0.73□□□□□ -2.29
SBP1P10080 IQG1YPL242C 4488 nt0.73□□□□□ -2.29
SBP1P10080 YKL145W-AYKL145W-A 93 nt0.71□□□□□ -2.3
SBP1P10080 tT(AGU)BtT(AGU)B 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)CtT(AGU)C 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)DtT(AGU)D 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)HtT(AGU)H 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)I1tT(AGU)I1 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)I2tT(AGU)I2 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)JtT(AGU)J 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)N1tT(AGU)N1 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)N2tT(AGU)N2 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)O1tT(AGU)O1 73 nt0.7□□□□□ -2.3
SBP1P10080 tT(AGU)O2tT(AGU)O2 73 nt0.7□□□□□ -2.3
SBP1P10080 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms