Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 FIG2YCR089W 4830 nt1.73□□□□□ -2.13
TY1A-HP0C2I4 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
TY1A-HP0C2I4 MLP2YIL149C 5040 nt1.67□□□□□ -2.14
TY1A-HP0C2I4 TRM732YMR259C 4263 nt1.66□□□□□ -2.14
TY1A-HP0C2I4 CFT1YDR301W 4074 nt1.64□□□□□ -2.15
TY1A-HP0C2I4 CDC39YCR093W 6327 nt1.63□□□□□ -2.15
TY1A-HP0C2I4 LAA1YJL207C 6045 nt1.63□□□□□ -2.15
TY1A-HP0C2I4 YGR130CYGR130C 2451 nt1.63□□□□□ -2.15
TY1A-HP0C2I4 snR67snR67 82 nt1.61□□□□□ -2.15
TY1A-HP0C2I4 YDL114W-AYDL114W-A 114 nt1.59□□□□□ -2.15
TY1A-HP0C2I4 YNL284C-BYNL284C-B 5268 nt1.58□□□□□ -2.16
TY1A-HP0C2I4 tT(UGU)HtT(UGU)H 72 nt1.57□□□□□ -2.16
TY1A-HP0C2I4 YMR247W-AYMR247W-A 144 nt1.57□□□□□ -2.16
TY1A-HP0C2I4 VPS15YBR097W 4365 nt1.56□□□□□ -2.16
TY1A-HP0C2I4 NUP192YJL039C 5052 nt1.56□□□□□ -2.16
TY1A-HP0C2I4 BRR2YER172C 6492 nt1.55□□□□□ -2.16
TY1A-HP0C2I4 YOR376W-AYOR376W-A 156 nt1.54□□□□□ -2.16
TY1A-HP0C2I4 SPT7YBR081C 3999 nt1.54□□□□□ -2.16
TY1A-HP0C2I4 YKL106C-AYKL106C-A 120 nt1.51□□□□□ -2.17
TY1A-HP0C2I4 SSK2YNR031C 4740 nt1.51□□□□□ -2.17
TY1A-HP0C2I4 PEP1YBL017C 4740 nt1.49□□□□□ -2.17
TY1A-HP0C2I4 FAB1YFR019W 6837 nt1.45□□□□□ -2.18
TY1A-HP0C2I4 YNL054W-BYNL054W-B 5250 nt1.44□□□□□ -2.18
TY1A-HP0C2I4 YMR160WYMR160W 2451 nt1.43□□□□□ -2.18
TY1A-HP0C2I4 tV(UAC)QtV(UAC)Q 76 nt1.42□□□□□ -2.18
TY1A-HP0C2I4 VAM6YDL077C 3150 nt1.42□□□□□ -2.18
TY1A-HP0C2I4 MYO1YHR023W 5787 nt1.4□□□□□ -2.19
TY1A-HP0C2I4 YOR192C-BYOR192C-B 5313 nt1.39□□□□□ -2.19
TY1A-HP0C2I4 IRA1YBR140C 9279 nt1.36□□□□□ -2.19
TY1A-HP0C2I4 YMR272W-BYMR272W-B 108 nt1.36□□□□□ -2.19
TY1A-HP0C2I4 LTE1YAL024C 4308 nt1.34□□□□□ -2.19
TY1A-HP0C2I4 MEC1YBR136W 7107 nt1.34□□□□□ -2.19
TY1A-HP0C2I4 snR40snR40 97 nt1.34□□□□□ -2.19
TY1A-HP0C2I4 CCH1YGR217W 6120 nt1.33□□□□□ -2.2
TY1A-HP0C2I4 tQ(UUG)E2tQ(UUG)E2 72 nt1.33□□□□□ -2.2
TY1A-HP0C2I4 SPC110YDR356W 2835 nt1.33□□□□□ -2.2
TY1A-HP0C2I4 HKR1YDR420W 5409 nt1.3□□□□□ -2.2
TY1A-HP0C2I4 YPR117WYPR117W 7470 nt1.28□□□□□ -2.21
TY1A-HP0C2I4 RKR1YMR247C 4689 nt1.27□□□□□ -2.21
TY1A-HP0C2I4 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
TY1A-HP0C2I4 BUD3YCL014W 4911 nt1.24□□□□□ -2.21
TY1A-HP0C2I4 PAU24YBR301W 363 nt1.17□□□□□ -2.22
TY1A-HP0C2I4 DOP1YDR141C 5097 nt1.14□□□□□ -2.23
TY1A-HP0C2I4 MLP1YKR095W 5628 nt1.13□□□□□ -2.23
TY1A-HP0C2I4 YBL100W-BYBL100W-B 5313 nt1.1□□□□□ -2.23
TY1A-HP0C2I4 snR77snR77 88 nt1.09□□□□□ -2.23
TY1A-HP0C2I4 YOR316C-AYOR316C-A 210 nt1.09□□□□□ -2.23
TY1A-HP0C2I4 BEM2YER155C 6504 nt1.07□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
TY1A-HP0C2I4 tV(UAC)BtV(UAC)B 74 nt1.04□□□□□ -2.24
TY1A-HP0C2I4 tV(UAC)DtV(UAC)D 74 nt1.04□□□□□ -2.24
TY1A-HP0C2I4 SBH2YER019C-A 267 nt1.02□□□□□ -2.25
TY1A-HP0C2I4 YOR186C-AYOR186C-A 210 nt1.01□□□□□ -2.25
TY1A-HP0C2I4 YJR029WYJR029W 5268 nt1□□□□□ -2.25
TY1A-HP0C2I4 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
TY1A-HP0C2I4 YML100W-AYML100W-A 174 nt0.99□□□□□ -2.25
TY1A-HP0C2I4 IML1YJR138W 4755 nt0.99□□□□□ -2.25
TY1A-HP0C2I4 tF(GAA)BtF(GAA)B 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)FtF(GAA)F 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)GtF(GAA)G 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)H1tF(GAA)H1 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)H2tF(GAA)H2 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)MtF(GAA)M 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)P1tF(GAA)P1 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 tF(GAA)P2tF(GAA)P2 73 nt0.93□□□□□ -2.26
TY1A-HP0C2I4 THO2YNL139C 4794 nt0.85□□□□□ -2.27
TY1A-HP0C2I4 IQG1YPL242C 4488 nt0.83□□□□□ -2.28
TY1A-HP0C2I4 YOL014WYOL014W 375 nt0.82□□□□□ -2.28
TY1A-HP0C2I4 EMT1tM(CAU)D 73 nt0.79□□□□□ -2.28
TY1A-HP0C2I4 EMT5tM(CAU)J1 73 nt0.79□□□□□ -2.28
TY1A-HP0C2I4 EMT3tM(CAU)J2 73 nt0.79□□□□□ -2.28
TY1A-HP0C2I4 EMT4tM(CAU)M 73 nt0.79□□□□□ -2.28
TY1A-HP0C2I4 EMT2tM(CAU)O2 73 nt0.79□□□□□ -2.28
TY1A-HP0C2I4 UTP20YBL004W 7482 nt0.78□□□□□ -2.28
TY1A-HP0C2I4 PAU9YBL108C-A 129 nt0.77□□□□□ -2.29
TY1A-HP0C2I4 YPR159C-AYPR159C-A 102 nt0.77□□□□□ -2.29
TY1A-HP0C2I4 SOV1YMR066W 2697 nt0.77□□□□□ -2.29
TY1A-HP0C2I4 YKL145W-AYKL145W-A 93 nt0.73□□□□□ -2.29
TY1A-HP0C2I4 ESP1YGR098C 4893 nt0.7□□□□□ -2.3
TY1A-HP0C2I4 snR128snR128 126 nt0.66□□□□□ -2.3
TY1A-HP0C2I4 UTP10YJL109C 5310 nt0.65□□□□□ -2.3
TY1A-HP0C2I4 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
TY1A-HP0C2I4 FMP27YLR454W 7887 nt0.58□□□□□ -2.32
TY1A-HP0C2I4 YJL113WYJL113W 4647 nt0.51□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)BtT(AGU)B 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)CtT(AGU)C 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)DtT(AGU)D 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)HtT(AGU)H 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)I1tT(AGU)I1 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)I2tT(AGU)I2 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)JtT(AGU)J 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)N1tT(AGU)N1 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)N2tT(AGU)N2 73 nt0.5□□□□□ -2.33
TY1A-HP0C2I4 tT(AGU)O1tT(AGU)O1 73 nt0.5□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms