Protein–RNA interactions for Protein: P00937

TRP3, Multifunctional tryptophan biosynthesis protein, yeastyeast

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRP3P00937 PMD1YER132C 5262 nt1.45□□□□□ -2.18
TRP3P00937 FYV8YGR196C 2454 nt1.44□□□□□ -2.18
TRP3P00937 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
TRP3P00937 YPL060C-AYPL060C-A 3315 nt1.44□□□□□ -2.18
TRP3P00937 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
TRP3P00937 PET111YMR257C 2403 nt1.43□□□□□ -2.18
TRP3P00937 tQ(UUG)QtQ(UUG)Q 76 nt1.43□□□□□ -2.18
TRP3P00937 NUP188YML103C 4968 nt1.42□□□□□ -2.18
TRP3P00937 TRM732YMR259C 4263 nt1.41□□□□□ -2.18
TRP3P00937 EST2YLR318W 2655 nt1.41□□□□□ -2.18
TRP3P00937 YLL006W-AYLL006W-A 177 nt1.4□□□□□ -2.19
TRP3P00937 BST1YFL025C 3090 nt1.38□□□□□ -2.19
TRP3P00937 MEC1YBR136W 7107 nt1.38□□□□□ -2.19
TRP3P00937 CAT8YMR280C 4302 nt1.38□□□□□ -2.19
TRP3P00937 CDC39YCR093W 6327 nt1.35□□□□□ -2.19
TRP3P00937 IRA1YBR140C 9279 nt1.34□□□□□ -2.19
TRP3P00937 HKR1YDR420W 5409 nt1.34□□□□□ -2.19
TRP3P00937 NUP192YJL039C 5052 nt1.34□□□□□ -2.2
TRP3P00937 YER090C-AYER090C-A 90 nt1.31□□□□□ -2.2
TRP3P00937 LAA1YJL207C 6045 nt1.31□□□□□ -2.2
TRP3P00937 CLU1YMR012W 3834 nt1.28□□□□□ -2.21
TRP3P00937 YGR130CYGR130C 2451 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
TRP3P00937 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
TRP3P00937 snR67snR67 82 nt1.21□□□□□ -2.22
TRP3P00937 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
TRP3P00937 YDL114W-AYDL114W-A 114 nt1.18□□□□□ -2.22
TRP3P00937 YNL054W-BYNL054W-B 5250 nt1.17□□□□□ -2.22
TRP3P00937 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.23
TRP3P00937 YOR376W-AYOR376W-A 156 nt1.13□□□□□ -2.23
TRP3P00937 YKL106C-AYKL106C-A 120 nt1.12□□□□□ -2.23
TRP3P00937 MLP2YIL149C 5040 nt1.11□□□□□ -2.23
TRP3P00937 YOR192C-BYOR192C-B 5313 nt1.1□□□□□ -2.23
TRP3P00937 VAM6YDL077C 3150 nt1.1□□□□□ -2.23
TRP3P00937 tV(UAC)QtV(UAC)Q 76 nt1.07□□□□□ -2.24
TRP3P00937 YMR160WYMR160W 2451 nt1.07□□□□□ -2.24
TRP3P00937 SCC2YDR180W 4482 nt1.06□□□□□ -2.24
TRP3P00937 RKR1YMR247C 4689 nt1.05□□□□□ -2.24
TRP3P00937 MYO1YHR023W 5787 nt1.03□□□□□ -2.24
TRP3P00937 tV(UAC)BtV(UAC)B 74 nt1.03□□□□□ -2.24
TRP3P00937 tV(UAC)DtV(UAC)D 74 nt1.03□□□□□ -2.24
TRP3P00937 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
TRP3P00937 IML1YJR138W 4755 nt1.01□□□□□ -2.25
TRP3P00937 BEM2YER155C 6504 nt1□□□□□ -2.25
TRP3P00937 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
TRP3P00937 snR40snR40 97 nt0.98□□□□□ -2.25
TRP3P00937 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
TRP3P00937 LTE1YAL024C 4308 nt0.97□□□□□ -2.25
TRP3P00937 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
TRP3P00937 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
TRP3P00937 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
TRP3P00937 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
TRP3P00937 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
TRP3P00937 YJR029WYJR029W 5268 nt0.95□□□□□ -2.26
TRP3P00937 YPR137C-BYPR137C-B 5268 nt0.95□□□□□ -2.26
TRP3P00937 PAU24YBR301W 363 nt0.91□□□□□ -2.26
TRP3P00937 YBL100W-BYBL100W-B 5313 nt0.88□□□□□ -2.27
TRP3P00937 snR77snR77 88 nt0.81□□□□□ -2.28
TRP3P00937 YOR316C-AYOR316C-A 210 nt0.8□□□□□ -2.28
TRP3P00937 MLP1YKR095W 5628 nt0.8□□□□□ -2.28
TRP3P00937 YML100W-AYML100W-A 174 nt0.77□□□□□ -2.29
TRP3P00937 SBH2YER019C-A 267 nt0.74□□□□□ -2.29
TRP3P00937 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
TRP3P00937 YPR159C-AYPR159C-A 102 nt0.7□□□□□ -2.3
TRP3P00937 tT(AGU)BtT(AGU)B 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)CtT(AGU)C 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)DtT(AGU)D 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)HtT(AGU)H 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)I1tT(AGU)I1 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)I2tT(AGU)I2 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)JtT(AGU)J 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)N1tT(AGU)N1 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)N2tT(AGU)N2 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)O1tT(AGU)O1 73 nt0.64□□□□□ -2.31
TRP3P00937 tT(AGU)O2tT(AGU)O2 73 nt0.64□□□□□ -2.31
TRP3P00937 YMR272W-AYMR272W-A 114 nt0.63□□□□□ -2.31
TRP3P00937 THO2YNL139C 4794 nt0.62□□□□□ -2.31
TRP3P00937 SOV1YMR066W 2697 nt0.59□□□□□ -2.31
TRP3P00937 IQG1YPL242C 4488 nt0.58□□□□□ -2.32
TRP3P00937 PAU9YBL108C-A 129 nt0.55□□□□□ -2.32
TRP3P00937 UTP20YBL004W 7482 nt0.54□□□□□ -2.32
TRP3P00937 ESP1YGR098C 4893 nt0.54□□□□□ -2.32
TRP3P00937 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
TRP3P00937 tF(GAA)BtF(GAA)B 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)FtF(GAA)F 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)GtF(GAA)G 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)H1tF(GAA)H1 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)H2tF(GAA)H2 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)MtF(GAA)M 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)P1tF(GAA)P1 73 nt0.5□□□□□ -2.33
TRP3P00937 tF(GAA)P2tF(GAA)P2 73 nt0.5□□□□□ -2.33
TRP3P00937 snR128snR128 126 nt0.47□□□□□ -2.33
TRP3P00937 FMP27YLR454W 7887 nt0.44□□□□□ -2.34
TRP3P00937 YKL145W-AYKL145W-A 93 nt0.4□□□□□ -2.35
TRP3P00937 YOL014WYOL014W 375 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 904.2 ms