Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.37■■■□□ 2.13
Atxn7Q8R4I1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.36■■■□□ 2.13
Atxn7Q8R4I1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Atxn7Q8R4I1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Atxn7Q8R4I1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Atxn7Q8R4I1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Atxn7Q8R4I1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Atxn7Q8R4I1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Atxn7Q8R4I1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Atxn7Q8R4I1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Atxn7Q8R4I1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Atxn7Q8R4I1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Atxn7Q8R4I1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Atxn7Q8R4I1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Atxn7Q8R4I1 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.32■■■□□ 2.12
Atxn7Q8R4I1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Atxn7Q8R4I1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.31■■■□□ 2.12
Atxn7Q8R4I1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Atxn7Q8R4I1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Atxn7Q8R4I1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Atxn7Q8R4I1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Atxn7Q8R4I1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.29■■■□□ 2.12
Atxn7Q8R4I1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Atxn7Q8R4I1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Atxn7Q8R4I1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Atxn7Q8R4I1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.25■■■□□ 2.11
Atxn7Q8R4I1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Atxn7Q8R4I1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.25■■■□□ 2.11
Atxn7Q8R4I1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Atxn7Q8R4I1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Atxn7Q8R4I1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Atxn7Q8R4I1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.24■■■□□ 2.11
Atxn7Q8R4I1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Atxn7Q8R4I1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
Atxn7Q8R4I1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Atxn7Q8R4I1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Atxn7Q8R4I1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Atxn7Q8R4I1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Atxn7Q8R4I1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Atxn7Q8R4I1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Atxn7Q8R4I1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Atxn7Q8R4I1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Atxn7Q8R4I1 Particl-201ENSMUST00000205370 1560 ntBASIC28.19■■■□□ 2.1
Atxn7Q8R4I1 Mir6538-201ENSMUST00000183713 110 ntBASIC28.18■■■□□ 2.1
Atxn7Q8R4I1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Atxn7Q8R4I1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Atxn7Q8R4I1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.17■■■□□ 2.1
Atxn7Q8R4I1 Gm6311-201ENSMUST00000073790 878 ntBASIC28.17■■■□□ 2.1
Atxn7Q8R4I1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Atxn7Q8R4I1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Atxn7Q8R4I1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Atxn7Q8R4I1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Atxn7Q8R4I1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Atxn7Q8R4I1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Atxn7Q8R4I1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.14■■■□□ 2.1
Atxn7Q8R4I1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.14■■■□□ 2.1
Atxn7Q8R4I1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Atxn7Q8R4I1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Atxn7Q8R4I1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.13■■■□□ 2.09
Atxn7Q8R4I1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Atxn7Q8R4I1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.09■■■□□ 2.09
Atxn7Q8R4I1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atxn7Q8R4I1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Atxn7Q8R4I1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Atxn7Q8R4I1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.08■■■□□ 2.09
Atxn7Q8R4I1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Atxn7Q8R4I1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Atxn7Q8R4I1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
Atxn7Q8R4I1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Atxn7Q8R4I1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Atxn7Q8R4I1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Atxn7Q8R4I1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Atxn7Q8R4I1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
Atxn7Q8R4I1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Atxn7Q8R4I1 Zxda-201ENSMUST00000117281 2621 ntBASIC28.02■■■□□ 2.08
Atxn7Q8R4I1 Cap2-205ENSMUST00000225824 1634 ntBASIC28.02■■■□□ 2.08
Atxn7Q8R4I1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atxn7Q8R4I1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atxn7Q8R4I1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Atxn7Q8R4I1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Atxn7Q8R4I1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28■■■□□ 2.07
Atxn7Q8R4I1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Atxn7Q8R4I1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Atxn7Q8R4I1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.96■■■□□ 2.07
Atxn7Q8R4I1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Atxn7Q8R4I1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.96■■■□□ 2.07
Atxn7Q8R4I1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Atxn7Q8R4I1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Atxn7Q8R4I1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Atxn7Q8R4I1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Atxn7Q8R4I1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Atxn7Q8R4I1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Atxn7Q8R4I1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Atxn7Q8R4I1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Atxn7Q8R4I1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Atxn7Q8R4I1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.9■■■□□ 2.06
Atxn7Q8R4I1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Atxn7Q8R4I1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Atxn7Q8R4I1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Atxn7Q8R4I1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms