Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.84■■■□□ 2.37
Smc4Q8CG47 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.83■■■□□ 2.37
Smc4Q8CG47 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.83■■■□□ 2.37
Smc4Q8CG47 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.82■■■□□ 2.36
Smc4Q8CG47 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc4Q8CG47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc4Q8CG47 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.81■■■□□ 2.36
Smc4Q8CG47 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Smc4Q8CG47 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Smc4Q8CG47 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Smc4Q8CG47 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc4Q8CG47 Gm11599-201ENSMUST00000118720 878 ntBASIC29.76■■■□□ 2.35
Smc4Q8CG47 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc4Q8CG47 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Smc4Q8CG47 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Smc4Q8CG47 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc4Q8CG47 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc4Q8CG47 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Smc4Q8CG47 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Smc4Q8CG47 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.69■■■□□ 2.34
Smc4Q8CG47 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
Smc4Q8CG47 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Smc4Q8CG47 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.65■■■□□ 2.34
Smc4Q8CG47 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
Smc4Q8CG47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.62■■■□□ 2.33
Smc4Q8CG47 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc4Q8CG47 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Smc4Q8CG47 Particl-201ENSMUST00000205370 1560 ntBASIC29.6■■■□□ 2.33
Smc4Q8CG47 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Smc4Q8CG47 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.56■■■□□ 2.32
Smc4Q8CG47 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.54■■■□□ 2.32
Smc4Q8CG47 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.53■■■□□ 2.32
Smc4Q8CG47 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
Smc4Q8CG47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
Smc4Q8CG47 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Smc4Q8CG47 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Smc4Q8CG47 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Smc4Q8CG47 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Smc4Q8CG47 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Smc4Q8CG47 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.43■■■□□ 2.3
Smc4Q8CG47 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
Smc4Q8CG47 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc4Q8CG47 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.4■■■□□ 2.3
Smc4Q8CG47 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Smc4Q8CG47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc4Q8CG47 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc4Q8CG47 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc4Q8CG47 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Smc4Q8CG47 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smc4Q8CG47 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
Smc4Q8CG47 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.35■■■□□ 2.29
Smc4Q8CG47 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.34■■■□□ 2.29
Smc4Q8CG47 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Smc4Q8CG47 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Smc4Q8CG47 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc4Q8CG47 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc4Q8CG47 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms