Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3rf2Q8BZT2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
Sh3rf2Q8BZT2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3rf2Q8BZT2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Sh3rf2Q8BZT2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3rf2Q8BZT2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3rf2Q8BZT2 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.61■■□□□ 1.53
Sh3rf2Q8BZT2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sh3rf2Q8BZT2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf2Q8BZT2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf2Q8BZT2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf2Q8BZT2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sh3rf2Q8BZT2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Sh3rf2Q8BZT2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sh3rf2Q8BZT2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.57■■□□□ 1.52
Sh3rf2Q8BZT2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.56■■□□□ 1.52
Sh3rf2Q8BZT2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sh3rf2Q8BZT2 Zxda-201ENSMUST00000117281 2621 ntBASIC24.56■■□□□ 1.52
Sh3rf2Q8BZT2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sh3rf2Q8BZT2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Sh3rf2Q8BZT2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3rf2Q8BZT2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3rf2Q8BZT2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3rf2Q8BZT2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3rf2Q8BZT2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3rf2Q8BZT2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3rf2Q8BZT2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.49■■□□□ 1.51
Sh3rf2Q8BZT2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3rf2Q8BZT2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3rf2Q8BZT2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sh3rf2Q8BZT2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3rf2Q8BZT2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3rf2Q8BZT2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.45■■□□□ 1.5
Sh3rf2Q8BZT2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3rf2Q8BZT2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3rf2Q8BZT2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Sh3rf2Q8BZT2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3rf2Q8BZT2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.42■■□□□ 1.5
Sh3rf2Q8BZT2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.42■■□□□ 1.5
Sh3rf2Q8BZT2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Sh3rf2Q8BZT2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 Particl-201ENSMUST00000205370 1560 ntBASIC24.4■■□□□ 1.5
Sh3rf2Q8BZT2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.39■■□□□ 1.5
Sh3rf2Q8BZT2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.38■■□□□ 1.49
Sh3rf2Q8BZT2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.38■■□□□ 1.49
Sh3rf2Q8BZT2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3rf2Q8BZT2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3rf2Q8BZT2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Sh3rf2Q8BZT2 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.36■■□□□ 1.49
Sh3rf2Q8BZT2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh3rf2Q8BZT2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Sh3rf2Q8BZT2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Sh3rf2Q8BZT2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.35■■□□□ 1.49
Sh3rf2Q8BZT2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.35■■□□□ 1.49
Sh3rf2Q8BZT2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.35■■□□□ 1.49
Sh3rf2Q8BZT2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3rf2Q8BZT2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3rf2Q8BZT2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Sh3rf2Q8BZT2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf2Q8BZT2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf2Q8BZT2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf2Q8BZT2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf2Q8BZT2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3rf2Q8BZT2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Sh3rf2Q8BZT2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Sh3rf2Q8BZT2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3rf2Q8BZT2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Sh3rf2Q8BZT2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.28■■□□□ 1.48
Sh3rf2Q8BZT2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sh3rf2Q8BZT2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sh3rf2Q8BZT2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3rf2Q8BZT2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3rf2Q8BZT2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3rf2Q8BZT2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Sh3rf2Q8BZT2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3rf2Q8BZT2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
Sh3rf2Q8BZT2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3rf2Q8BZT2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3rf2Q8BZT2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.24■■□□□ 1.47
Sh3rf2Q8BZT2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3rf2Q8BZT2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Sh3rf2Q8BZT2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3rf2Q8BZT2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sh3rf2Q8BZT2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Sh3rf2Q8BZT2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Sh3rf2Q8BZT2 Gm6311-201ENSMUST00000073790 878 ntBASIC24.2■■□□□ 1.46
Sh3rf2Q8BZT2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3rf2Q8BZT2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Sh3rf2Q8BZT2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3rf2Q8BZT2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3rf2Q8BZT2 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.18■■□□□ 1.46
Sh3rf2Q8BZT2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.18■■□□□ 1.46
Sh3rf2Q8BZT2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Sh3rf2Q8BZT2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Sh3rf2Q8BZT2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms