Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Tdp1Q8BJ37 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Tdp1Q8BJ37 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
Tdp1Q8BJ37 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Tdp1Q8BJ37 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Tdp1Q8BJ37 Pcf11-205ENSMUST00000208255 1720 ntBASIC27■■□□□ 1.91
Tdp1Q8BJ37 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27■■□□□ 1.91
Tdp1Q8BJ37 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tdp1Q8BJ37 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.99■■□□□ 1.91
Tdp1Q8BJ37 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.99■■□□□ 1.91
Tdp1Q8BJ37 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tdp1Q8BJ37 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Tdp1Q8BJ37 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Tdp1Q8BJ37 Mir6538-201ENSMUST00000183713 110 ntBASIC26.96■■□□□ 1.91
Tdp1Q8BJ37 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.91
Tdp1Q8BJ37 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Tdp1Q8BJ37 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.95■■□□□ 1.9
Tdp1Q8BJ37 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
Tdp1Q8BJ37 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Tdp1Q8BJ37 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Tdp1Q8BJ37 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Tdp1Q8BJ37 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Tdp1Q8BJ37 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Tdp1Q8BJ37 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Tdp1Q8BJ37 Particl-201ENSMUST00000205370 1560 ntBASIC26.92■■□□□ 1.9
Tdp1Q8BJ37 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tdp1Q8BJ37 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.92■■□□□ 1.9
Tdp1Q8BJ37 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tdp1Q8BJ37 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tdp1Q8BJ37 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Tdp1Q8BJ37 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tdp1Q8BJ37 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Tdp1Q8BJ37 Gm6311-201ENSMUST00000073790 878 ntBASIC26.9■■□□□ 1.9
Tdp1Q8BJ37 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Tdp1Q8BJ37 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Tdp1Q8BJ37 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Tdp1Q8BJ37 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Tdp1Q8BJ37 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
Tdp1Q8BJ37 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
Tdp1Q8BJ37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Tdp1Q8BJ37 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Tdp1Q8BJ37 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.84■■□□□ 1.89
Tdp1Q8BJ37 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.84■■□□□ 1.89
Tdp1Q8BJ37 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Tdp1Q8BJ37 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Tdp1Q8BJ37 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Tdp1Q8BJ37 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Tdp1Q8BJ37 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Tdp1Q8BJ37 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Tdp1Q8BJ37 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tdp1Q8BJ37 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tdp1Q8BJ37 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Tdp1Q8BJ37 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.81■■□□□ 1.88
Tdp1Q8BJ37 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Tdp1Q8BJ37 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Tdp1Q8BJ37 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.79■■□□□ 1.88
Tdp1Q8BJ37 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
Tdp1Q8BJ37 Cap2-205ENSMUST00000225824 1634 ntBASIC26.78■■□□□ 1.88
Tdp1Q8BJ37 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Tdp1Q8BJ37 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
Tdp1Q8BJ37 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Tdp1Q8BJ37 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
Tdp1Q8BJ37 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Tdp1Q8BJ37 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Tdp1Q8BJ37 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.75■■□□□ 1.87
Tdp1Q8BJ37 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Tdp1Q8BJ37 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Tdp1Q8BJ37 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Tdp1Q8BJ37 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Tdp1Q8BJ37 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.71■■□□□ 1.87
Tdp1Q8BJ37 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Tdp1Q8BJ37 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Tdp1Q8BJ37 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Tdp1Q8BJ37 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tdp1Q8BJ37 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Tdp1Q8BJ37 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Tdp1Q8BJ37 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Tdp1Q8BJ37 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Tdp1Q8BJ37 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.68■■□□□ 1.86
Tdp1Q8BJ37 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Tdp1Q8BJ37 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Tdp1Q8BJ37 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Tdp1Q8BJ37 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Tdp1Q8BJ37 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tdp1Q8BJ37 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Tdp1Q8BJ37 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tdp1Q8BJ37 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tdp1Q8BJ37 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.63■■□□□ 1.85
Tdp1Q8BJ37 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Tdp1Q8BJ37 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Tdp1Q8BJ37 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Tdp1Q8BJ37 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Tdp1Q8BJ37 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Tdp1Q8BJ37 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.58■■□□□ 1.85
Tdp1Q8BJ37 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms