Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Negr1Q80Z24 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Negr1Q80Z24 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Negr1Q80Z24 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Negr1Q80Z24 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Negr1Q80Z24 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Negr1Q80Z24 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Negr1Q80Z24 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Negr1Q80Z24 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Negr1Q80Z24 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Negr1Q80Z24 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Negr1Q80Z24 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Negr1Q80Z24 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Negr1Q80Z24 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Negr1Q80Z24 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Negr1Q80Z24 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Negr1Q80Z24 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Negr1Q80Z24 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21■□□□□ 0.95
Negr1Q80Z24 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Negr1Q80Z24 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Negr1Q80Z24 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Negr1Q80Z24 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Negr1Q80Z24 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Negr1Q80Z24 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Negr1Q80Z24 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Negr1Q80Z24 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Negr1Q80Z24 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Negr1Q80Z24 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Negr1Q80Z24 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Negr1Q80Z24 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Negr1Q80Z24 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Negr1Q80Z24 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.94■□□□□ 0.94
Negr1Q80Z24 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Negr1Q80Z24 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.93■□□□□ 0.94
Negr1Q80Z24 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Negr1Q80Z24 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Negr1Q80Z24 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Negr1Q80Z24 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Negr1Q80Z24 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Negr1Q80Z24 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Negr1Q80Z24 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Negr1Q80Z24 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
Negr1Q80Z24 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Gm30023-201ENSMUST00000197970 889 ntBASIC20.89■□□□□ 0.93
Negr1Q80Z24 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Negr1Q80Z24 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Negr1Q80Z24 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Negr1Q80Z24 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Negr1Q80Z24 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Negr1Q80Z24 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Negr1Q80Z24 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
Negr1Q80Z24 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Negr1Q80Z24 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Negr1Q80Z24 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Negr1Q80Z24 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Negr1Q80Z24 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Negr1Q80Z24 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Negr1Q80Z24 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Negr1Q80Z24 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Negr1Q80Z24 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Negr1Q80Z24 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.84■□□□□ 0.93
Negr1Q80Z24 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Negr1Q80Z24 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Negr1Q80Z24 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Negr1Q80Z24 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Negr1Q80Z24 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Negr1Q80Z24 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Negr1Q80Z24 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.82■□□□□ 0.92
Negr1Q80Z24 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Negr1Q80Z24 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.81■□□□□ 0.92
Negr1Q80Z24 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Negr1Q80Z24 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Negr1Q80Z24 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Negr1Q80Z24 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Negr1Q80Z24 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Negr1Q80Z24 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.8■□□□□ 0.92
Negr1Q80Z24 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Negr1Q80Z24 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Negr1Q80Z24 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.79■□□□□ 0.92
Negr1Q80Z24 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Negr1Q80Z24 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Negr1Q80Z24 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms