Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ccne1Q61457 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ccne1Q61457 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Ccne1Q61457 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ccne1Q61457 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccne1Q61457 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccne1Q61457 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.91■■■□□ 2.7
Ccne1Q61457 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ccne1Q61457 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.91■■■□□ 2.7
Ccne1Q61457 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccne1Q61457 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccne1Q61457 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ccne1Q61457 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccne1Q61457 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ccne1Q61457 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ccne1Q61457 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Ccne1Q61457 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccne1Q61457 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.86■■■□□ 2.69
Ccne1Q61457 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccne1Q61457 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ccne1Q61457 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccne1Q61457 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccne1Q61457 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.85■■■□□ 2.69
Ccne1Q61457 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.85■■■□□ 2.69
Ccne1Q61457 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ccne1Q61457 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Ccne1Q61457 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ccne1Q61457 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccne1Q61457 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ccne1Q61457 Mir6538-201ENSMUST00000183713 110 ntBASIC31.81■■■□□ 2.68
Ccne1Q61457 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccne1Q61457 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ccne1Q61457 Particl-201ENSMUST00000205370 1560 ntBASIC31.8■■■□□ 2.68
Ccne1Q61457 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Ccne1Q61457 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ccne1Q61457 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ccne1Q61457 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Ccne1Q61457 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.77■■■□□ 2.68
Ccne1Q61457 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.76■■■□□ 2.67
Ccne1Q61457 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ccne1Q61457 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ccne1Q61457 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Ccne1Q61457 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ccne1Q61457 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Ccne1Q61457 Gm6311-201ENSMUST00000073790 878 ntBASIC31.73■■■□□ 2.67
Ccne1Q61457 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ccne1Q61457 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Ccne1Q61457 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
Ccne1Q61457 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ccne1Q61457 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Ccne1Q61457 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Ccne1Q61457 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Ccne1Q61457 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.68■■■□□ 2.66
Ccne1Q61457 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ccne1Q61457 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ccne1Q61457 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.67■■■□□ 2.66
Ccne1Q61457 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.67■■■□□ 2.66
Ccne1Q61457 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ccne1Q61457 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Ccne1Q61457 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Ccne1Q61457 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ccne1Q61457 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
Ccne1Q61457 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccne1Q61457 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ccne1Q61457 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ccne1Q61457 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ccne1Q61457 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31.63■■■□□ 2.65
Ccne1Q61457 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
Ccne1Q61457 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Ccne1Q61457 Cap2-205ENSMUST00000225824 1634 ntBASIC31.6■■■□□ 2.65
Ccne1Q61457 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ccne1Q61457 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Ccne1Q61457 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ccne1Q61457 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.58■■■□□ 2.65
Ccne1Q61457 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Ccne1Q61457 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ccne1Q61457 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.55■■■□□ 2.64
Ccne1Q61457 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ccne1Q61457 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Ccne1Q61457 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccne1Q61457 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccne1Q61457 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccne1Q61457 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ccne1Q61457 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.52■■■□□ 2.64
Ccne1Q61457 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Ccne1Q61457 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Ccne1Q61457 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccne1Q61457 Zxda-201ENSMUST00000117281 2621 ntBASIC31.48■■■□□ 2.63
Ccne1Q61457 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccne1Q61457 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.47■■■□□ 2.63
Ccne1Q61457 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccne1Q61457 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Ccne1Q61457 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccne1Q61457 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ccne1Q61457 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
Ccne1Q61457 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccne1Q61457 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccne1Q61457 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccne1Q61457 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccne1Q61457 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms