Protein–RNA interactions for Protein: P53047

RTA1, Protein RTA1, yeastyeast

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTA1P53047 NIF3YGL221C 867 nt8.65□□□□□ -1.02
RTA1P53047 ATG22YCL038C 1587 nt8.65□□□□□ -1.03
RTA1P53047 KDX1YKL161C 1302 nt8.64□□□□□ -1.03
RTA1P53047 APS2YJR058C 444 nt8.64□□□□□ -1.03
RTA1P53047 AGP3YFL055W 1677 nt8.64□□□□□ -1.03
RTA1P53047 DTR1YBR180W 1719 nt8.63□□□□□ -1.03
RTA1P53047 KGD2YDR148C 1392 nt8.63□□□□□ -1.03
RTA1P53047 PAU5YFL020C 369 nt8.62□□□□□ -1.03
RTA1P53047 REC114YMR133W 1287 nt8.62□□□□□ -1.03
RTA1P53047 SPE2YOL052C 1191 nt8.62□□□□□ -1.03
RTA1P53047 NAM8YHR086W 1572 nt8.61□□□□□ -1.03
RTA1P53047 REG2YBR050C 1017 nt8.6□□□□□ -1.03
RTA1P53047 SRP54YPR088C 1626 nt8.59□□□□□ -1.03
RTA1P53047 SBP1YHL034C 885 nt8.59□□□□□ -1.03
RTA1P53047 IDP3YNL009W 1263 nt8.59□□□□□ -1.03
RTA1P53047 BNS1YGR230W 414 nt8.58□□□□□ -1.04
RTA1P53047 tS(GCU)LtS(GCU)L 80 nt8.58□□□□□ -1.04
RTA1P53047 GPM1YKL152C 744 nt8.58□□□□□ -1.04
RTA1P53047 SAN1YDR143C 1833 nt8.58□□□□□ -1.04
RTA1P53047 tE(CUC)DtE(CUC)D 72 nt8.57□□□□□ -1.04
RTA1P53047 tE(CUC)ItE(CUC)I 72 nt8.57□□□□□ -1.04
RTA1P53047 STP3YLR375W 1032 nt8.57□□□□□ -1.04
RTA1P53047 YHL008CYHL008C 1884 nt8.57□□□□□ -1.04
RTA1P53047 THP3YPR045C 1413 nt8.56□□□□□ -1.04
RTA1P53047 ATG17YLR423C 1254 nt8.56□□□□□ -1.04
RTA1P53047 FSH2YMR222C 672 nt8.56□□□□□ -1.04
RTA1P53047 YHR131CYHR131C 2553 nt8.56□□□□□ -1.04
RTA1P53047 GGA2YHR108W 1758 nt8.56□□□□□ -1.04
RTA1P53047 SFP1YLR403W 2052 nt8.55□□□□□ -1.04
RTA1P53047 PAR32YDL173W 888 nt8.55□□□□□ -1.04
RTA1P53047 REX2YLR059C 810 nt8.55□□□□□ -1.04
RTA1P53047 YBL095WYBL095W 813 nt8.55□□□□□ -1.04
RTA1P53047 NPP2YEL016C 1482 nt8.54□□□□□ -1.04
RTA1P53047 MGM101YJR144W 810 nt8.54□□□□□ -1.04
RTA1P53047 PGC1YPL206C 966 nt8.54□□□□□ -1.04
RTA1P53047 HDA1YNL021W 2121 nt8.53□□□□□ -1.04
RTA1P53047 NAS2YIL007C 663 nt8.53□□□□□ -1.04
RTA1P53047 ESS1YJR017C 513 nt8.52□□□□□ -1.05
RTA1P53047 YKR012CYKR012C 378 nt8.52□□□□□ -1.05
RTA1P53047 YMC2YBR104W 990 nt8.52□□□□□ -1.05
RTA1P53047 GAS1YMR307W 1680 nt8.51□□□□□ -1.05
RTA1P53047 YNL067W-AYNL067W-A 147 nt8.51□□□□□ -1.05
RTA1P53047 YPT11YNL304W 1254 nt8.51□□□□□ -1.05
RTA1P53047 THI3YDL080C 1830 nt8.51□□□□□ -1.05
RTA1P53047 HMG2YLR450W 3138 nt8.51□□□□□ -1.05
RTA1P53047 MET2YNL277W 1461 nt8.51□□□□□ -1.05
RTA1P53047 NBA1YOL070C 1506 nt8.5□□□□□ -1.05
RTA1P53047 IGD1YFR017C 588 nt8.5□□□□□ -1.05
RTA1P53047 PTC6YCR079W 1329 nt8.5□□□□□ -1.05
RTA1P53047 YMR316C-BYMR316C-B 309 nt8.49□□□□□ -1.05
RTA1P53047 ILV2YMR108W 2064 nt8.48□□□□□ -1.05
RTA1P53047 AAC3YBR085W 924 nt8.47□□□□□ -1.05
RTA1P53047 YBR232CYBR232C 360 nt8.47□□□□□ -1.05
RTA1P53047 CDD1YLR245C 429 nt8.46□□□□□ -1.06
RTA1P53047 YHM2YMR241W 945 nt8.46□□□□□ -1.06
RTA1P53047 SDS24YBR214W 1584 nt8.45□□□□□ -1.06
RTA1P53047 TPO4YOR273C 1980 nt8.45□□□□□ -1.06
RTA1P53047 MRS4YKR052C 915 nt8.45□□□□□ -1.06
RTA1P53047 AAT1YKL106W 1356 nt8.45□□□□□ -1.06
RTA1P53047 ADH3YMR083W 1128 nt8.44□□□□□ -1.06
RTA1P53047 YNL165WYNL165W 1221 nt8.44□□□□□ -1.06
RTA1P53047 MTO1YGL236C 2010 nt8.43□□□□□ -1.06
RTA1P53047 PHB2YGR231C 933 nt8.43□□□□□ -1.06
RTA1P53047 MOB1YIL106W 945 nt8.43□□□□□ -1.06
RTA1P53047 LYS20YDL182W 1287 nt8.42□□□□□ -1.06
RTA1P53047 RSM7YJR113C 744 nt8.42□□□□□ -1.06
RTA1P53047 ENO1YGR254W 1314 nt8.42□□□□□ -1.06
RTA1P53047 VBA3YCL069W 1377 nt8.42□□□□□ -1.06
RTA1P53047 YJL211CYJL211C 444 nt8.41□□□□□ -1.06
RTA1P53047 EMC3YKL207W 762 nt8.39□□□□□ -1.07
RTA1P53047 TPN1YGL186C 1740 nt8.39□□□□□ -1.07
RTA1P53047 TRP2YER090W 1524 nt8.39□□□□□ -1.07
RTA1P53047 FET5YFL041W 1869 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)DtA(AGC)D 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)FtA(AGC)F 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)GtA(AGC)G 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)HtA(AGC)H 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)JtA(AGC)J 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)K1tA(AGC)K1 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)K2tA(AGC)K2 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)LtA(AGC)L 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)M1tA(AGC)M1 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)M2tA(AGC)M2 73 nt8.38□□□□□ -1.07
RTA1P53047 tA(AGC)PtA(AGC)P 73 nt8.38□□□□□ -1.07
RTA1P53047 TMS1YDR105C 1422 nt8.37□□□□□ -1.07
RTA1P53047 THI6YPL214C 1623 nt8.37□□□□□ -1.07
RTA1P53047 FLX1YIL134W 936 nt8.37□□□□□ -1.07
RTA1P53047 IPL1YPL209C 1104 nt8.37□□□□□ -1.07
RTA1P53047 YOR072WYOR072W 315 nt8.36□□□□□ -1.07
RTA1P53047 YIL177CYIL177C 5277 nt8.36□□□□□ -1.07
RTA1P53047 YRF1-3YGR296W 5580 nt8.35□□□□□ -1.07
RTA1P53047 YRF1-6YNL339C 5580 nt8.35□□□□□ -1.07
RTA1P53047 YRF1-7YPL283C 5580 nt8.35□□□□□ -1.07
RTA1P53047 YJL009WYJL009W 327 nt8.35□□□□□ -1.07
RTA1P53047 CYC3YAL039C 810 nt8.35□□□□□ -1.07
RTA1P53047 SEN2YLR105C 1134 nt8.35□□□□□ -1.07
RTA1P53047 tD(GUC)BtD(GUC)B 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)DtD(GUC)D 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)G1tD(GUC)G1 72 nt8.34□□□□□ -1.07
RTA1P53047 tD(GUC)G2tD(GUC)G2 72 nt8.34□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms