Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 tA(AGC)JtA(AGC)J 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)K1tA(AGC)K1 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)K2tA(AGC)K2 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)LtA(AGC)L 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)M1tA(AGC)M1 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)M2tA(AGC)M2 73 nt9.8□□□□□ -0.84
CIC1P38779 tA(AGC)PtA(AGC)P 73 nt9.8□□□□□ -0.84
CIC1P38779 NAP1YKR048C 1254 nt9.8□□□□□ -0.84
CIC1P38779 ADH3YMR083W 1128 nt9.8□□□□□ -0.84
CIC1P38779 FTH1YBR207W 1398 nt9.79□□□□□ -0.84
CIC1P38779 MDM35YKL053C-A 261 nt9.79□□□□□ -0.84
CIC1P38779 KGD2YDR148C 1392 nt9.78□□□□□ -0.84
CIC1P38779 SAN1YDR143C 1833 nt9.78□□□□□ -0.84
CIC1P38779 TPO4YOR273C 1980 nt9.75□□□□□ -0.85
CIC1P38779 KRR1YCL059C 951 nt9.75□□□□□ -0.85
CIC1P38779 REX2YLR059C 810 nt9.75□□□□□ -0.85
CIC1P38779 IPL1YPL209C 1104 nt9.75□□□□□ -0.85
CIC1P38779 DMA2YNL116W 1569 nt9.75□□□□□ -0.85
CIC1P38779 FLX1YIL134W 936 nt9.74□□□□□ -0.85
CIC1P38779 YKR012CYKR012C 378 nt9.74□□□□□ -0.85
CIC1P38779 RFC1YOR217W 2586 nt9.74□□□□□ -0.85
CIC1P38779 SRP54YPR088C 1626 nt9.74□□□□□ -0.85
CIC1P38779 SDS24YBR214W 1584 nt9.73□□□□□ -0.85
CIC1P38779 RSC4YKR008W 1878 nt9.71□□□□□ -0.85
CIC1P38779 YTH1YPR107C 627 nt9.71□□□□□ -0.86
CIC1P38779 VBA3YCL069W 1377 nt9.69□□□□□ -0.86
CIC1P38779 MOB1YIL106W 945 nt9.68□□□□□ -0.86
CIC1P38779 LEU4YNL104C 1860 nt9.68□□□□□ -0.86
CIC1P38779 HXT10YFL011W 1641 nt9.67□□□□□ -0.86
CIC1P38779 SLG1YOR008C 1137 nt9.67□□□□□ -0.86
CIC1P38779 YHR218WYHR218W 1812 nt9.67□□□□□ -0.86
CIC1P38779 MAE1YKL029C 2010 nt9.66□□□□□ -0.86
CIC1P38779 GTB1YDR221W 2109 nt9.65□□□□□ -0.86
CIC1P38779 ILV2YMR108W 2064 nt9.65□□□□□ -0.86
CIC1P38779 NAS6YGR232W 687 nt9.65□□□□□ -0.86
CIC1P38779 YCR025CYCR025C 411 nt9.64□□□□□ -0.87
CIC1P38779 SBP1YHL034C 885 nt9.64□□□□□ -0.87
CIC1P38779 THI3YDL080C 1830 nt9.63□□□□□ -0.87
CIC1P38779 PSD1YNL169C 1503 nt9.63□□□□□ -0.87
CIC1P38779 YNL067W-AYNL067W-A 147 nt9.63□□□□□ -0.87
CIC1P38779 YMR316C-BYMR316C-B 309 nt9.62□□□□□ -0.87
CIC1P38779 GAS1YMR307W 1680 nt9.61□□□□□ -0.87
CIC1P38779 BSP1YPR171W 1731 nt9.61□□□□□ -0.87
CIC1P38779 MAS1YLR163C 1389 nt9.61□□□□□ -0.87
CIC1P38779 PTC6YCR079W 1329 nt9.6□□□□□ -0.87
CIC1P38779 ENO1YGR254W 1314 nt9.6□□□□□ -0.87
CIC1P38779 tE(CUC)DtE(CUC)D 72 nt9.6□□□□□ -0.87
CIC1P38779 tE(CUC)ItE(CUC)I 72 nt9.6□□□□□ -0.87
CIC1P38779 YDR467CYDR467C 327 nt9.6□□□□□ -0.87
CIC1P38779 GPM1YKL152C 744 nt9.6□□□□□ -0.87
CIC1P38779 YPT11YNL304W 1254 nt9.6□□□□□ -0.87
CIC1P38779 AGP3YFL055W 1677 nt9.6□□□□□ -0.87
CIC1P38779 URA8YJR103W 1737 nt9.59□□□□□ -0.87
CIC1P38779 LYS20YDL182W 1287 nt9.59□□□□□ -0.87
CIC1P38779 CYC3YAL039C 810 nt9.59□□□□□ -0.87
CIC1P38779 ACO2YJL200C 2370 nt9.59□□□□□ -0.87
CIC1P38779 DTR1YBR180W 1719 nt9.58□□□□□ -0.88
CIC1P38779 GGA2YHR108W 1758 nt9.58□□□□□ -0.88
CIC1P38779 SWM1YDR260C 513 nt9.56□□□□□ -0.88
CIC1P38779 YFR020WYFR020W 699 nt9.56□□□□□ -0.88
CIC1P38779 SER2YGR208W 930 nt9.56□□□□□ -0.88
CIC1P38779 SRP102YKL154W 735 nt9.56□□□□□ -0.88
CIC1P38779 FAF1YIL019W 1041 nt9.55□□□□□ -0.88
CIC1P38779 NPP2YEL016C 1482 nt9.54□□□□□ -0.88
CIC1P38779 YLR280CYLR280C 351 nt9.54□□□□□ -0.88
CIC1P38779 CYT1YOR065W 930 nt9.54□□□□□ -0.88
CIC1P38779 SAM50YNL026W 1455 nt9.53□□□□□ -0.88
CIC1P38779 ERO1YML130C 1692 nt9.53□□□□□ -0.88
CIC1P38779 INH1YDL181W 258 nt9.52□□□□□ -0.89
CIC1P38779 BUR6YER159C 429 nt9.52□□□□□ -0.89
CIC1P38779 PUS5YLR165C 765 nt9.52□□□□□ -0.89
CIC1P38779 YCP4YCR004C 744 nt9.5□□□□□ -0.89
CIC1P38779 TGA1tA(UGC)A 73 nt9.49□□□□□ -0.89
CIC1P38779 tA(UGC)EtA(UGC)E 73 nt9.49□□□□□ -0.89
CIC1P38779 tA(UGC)GtA(UGC)G 73 nt9.49□□□□□ -0.89
CIC1P38779 tA(UGC)LtA(UGC)L 73 nt9.49□□□□□ -0.89
CIC1P38779 tA(UGC)OtA(UGC)O 73 nt9.49□□□□□ -0.89
CIC1P38779 BNS1YGR230W 414 nt9.49□□□□□ -0.89
CIC1P38779 YBL095WYBL095W 813 nt9.49□□□□□ -0.89
CIC1P38779 HTS1YPR033C 1641 nt9.49□□□□□ -0.89
CIC1P38779 YGR210CYGR210C 1236 nt9.48□□□□□ -0.89
CIC1P38779 YHM2YMR241W 945 nt9.48□□□□□ -0.89
CIC1P38779 RSM7YJR113C 744 nt9.47□□□□□ -0.89
CIC1P38779 AAC3YBR085W 924 nt9.47□□□□□ -0.89
CIC1P38779 TOK1YJL093C 2076 nt9.44□□□□□ -0.9
CIC1P38779 REC114YMR133W 1287 nt9.44□□□□□ -0.9
CIC1P38779 KDX1YKL161C 1302 nt9.44□□□□□ -0.9
CIC1P38779 FHN1YGR131W 525 nt9.43□□□□□ -0.9
CIC1P38779 YMC2YBR104W 990 nt9.42□□□□□ -0.9
CIC1P38779 TMS1YDR105C 1422 nt9.41□□□□□ -0.9
CIC1P38779 ATG17YLR423C 1254 nt9.41□□□□□ -0.9
CIC1P38779 YPL108WYPL108W 507 nt9.41□□□□□ -0.9
CIC1P38779 FET5YFL041W 1869 nt9.4□□□□□ -0.9
CIC1P38779 AAT1YKL106W 1356 nt9.4□□□□□ -0.9
CIC1P38779 GAL2YLR081W 1725 nt9.4□□□□□ -0.9
CIC1P38779 YDR306CYDR306C 1437 nt9.39□□□□□ -0.91
CIC1P38779 MRS4YKR052C 915 nt9.39□□□□□ -0.91
CIC1P38779 MTO1YGL236C 2010 nt9.39□□□□□ -0.91
CIC1P38779 SRN2YLR119W 642 nt9.38□□□□□ -0.91
CIC1P38779 RNA170RNA170 169 nt9.38□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 52.8 ms