Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.13■■■□□ 2.57
Prim1P20664 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Prim1P20664 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.11■■■□□ 2.57
Prim1P20664 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.11■■■□□ 2.57
Prim1P20664 Gm7432-201ENSMUST00000210343 879 ntBASIC31.11■■■□□ 2.57
Prim1P20664 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Prim1P20664 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Prim1P20664 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Prim1P20664 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.08■■■□□ 2.57
Prim1P20664 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Prim1P20664 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Prim1P20664 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Prim1P20664 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.07■■■□□ 2.56
Prim1P20664 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC31.04■■■□□ 2.56
Prim1P20664 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Prim1P20664 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Prim1P20664 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.01■■■□□ 2.56
Prim1P20664 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Prim1P20664 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Prim1P20664 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31■■■□□ 2.55
Prim1P20664 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Prim1P20664 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.98■■■□□ 2.55
Prim1P20664 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Prim1P20664 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Prim1P20664 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.97■■■□□ 2.55
Prim1P20664 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Prim1P20664 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
Prim1P20664 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Prim1P20664 Gm11599-201ENSMUST00000118720 878 ntBASIC30.94■■■□□ 2.54
Prim1P20664 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Prim1P20664 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
Prim1P20664 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.93■■■□□ 2.54
Prim1P20664 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Prim1P20664 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Prim1P20664 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
Prim1P20664 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.91■■■□□ 2.54
Prim1P20664 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.9■■■□□ 2.54
Prim1P20664 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Prim1P20664 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Prim1P20664 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.89■■■□□ 2.54
Prim1P20664 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Prim1P20664 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Prim1P20664 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Prim1P20664 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Prim1P20664 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC30.86■■■□□ 2.53
Prim1P20664 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Prim1P20664 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Prim1P20664 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Prim1P20664 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Prim1P20664 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Prim1P20664 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Prim1P20664 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Prim1P20664 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Prim1P20664 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.84■■■□□ 2.53
Prim1P20664 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Prim1P20664 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Prim1P20664 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC30.82■■■□□ 2.52
Prim1P20664 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
Prim1P20664 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Prim1P20664 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Prim1P20664 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.81■■■□□ 2.52
Prim1P20664 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Prim1P20664 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Prim1P20664 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Prim1P20664 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Prim1P20664 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.77■■■□□ 2.52
Prim1P20664 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Prim1P20664 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Prim1P20664 Amer2-203ENSMUST00000225247 2662 ntBASIC30.75■■■□□ 2.51
Prim1P20664 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Prim1P20664 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Prim1P20664 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Prim1P20664 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.73■■■□□ 2.51
Prim1P20664 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Prim1P20664 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Prim1P20664 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Prim1P20664 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Prim1P20664 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Prim1P20664 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.69■■■□□ 2.5
Prim1P20664 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
Prim1P20664 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
Prim1P20664 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Prim1P20664 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
Prim1P20664 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Prim1P20664 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.67■■■□□ 2.5
Prim1P20664 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.67■■■□□ 2.5
Prim1P20664 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Prim1P20664 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Prim1P20664 Particl-201ENSMUST00000205370 1560 ntBASIC30.66■■■□□ 2.5
Prim1P20664 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Prim1P20664 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Prim1P20664 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.65■■■□□ 2.5
Prim1P20664 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
Prim1P20664 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.62■■■□□ 2.49
Prim1P20664 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Prim1P20664 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Prim1P20664 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
Prim1P20664 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.61■■■□□ 2.49
Prim1P20664 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.61■■■□□ 2.49
Prim1P20664 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms