Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hoxb2P0C1T1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxb2P0C1T1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxb2P0C1T1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxb2P0C1T1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Hoxb2P0C1T1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxb2P0C1T1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxb2P0C1T1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxb2P0C1T1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.94■□□□□ 0.94
Hoxb2P0C1T1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb2P0C1T1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxb2P0C1T1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hoxb2P0C1T1 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.92■□□□□ 0.94
Hoxb2P0C1T1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb2P0C1T1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxb2P0C1T1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb2P0C1T1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxb2P0C1T1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxb2P0C1T1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hoxb2P0C1T1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.89■□□□□ 0.93
Hoxb2P0C1T1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb2P0C1T1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb2P0C1T1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxb2P0C1T1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb2P0C1T1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb2P0C1T1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Hoxb2P0C1T1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxb2P0C1T1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Hoxb2P0C1T1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb2P0C1T1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb2P0C1T1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxb2P0C1T1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hoxb2P0C1T1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxb2P0C1T1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Hoxb2P0C1T1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxb2P0C1T1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.84■□□□□ 0.93
Hoxb2P0C1T1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Hoxb2P0C1T1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxb2P0C1T1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.83■□□□□ 0.92
Hoxb2P0C1T1 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxb2P0C1T1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxb2P0C1T1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxb2P0C1T1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
Hoxb2P0C1T1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxb2P0C1T1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxb2P0C1T1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb2P0C1T1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb2P0C1T1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb2P0C1T1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxb2P0C1T1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Hoxb2P0C1T1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxb2P0C1T1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxb2P0C1T1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb2P0C1T1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxb2P0C1T1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.78■□□□□ 0.92
Hoxb2P0C1T1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.78■□□□□ 0.92
Hoxb2P0C1T1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.77■□□□□ 0.92
Hoxb2P0C1T1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb2P0C1T1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxb2P0C1T1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxb2P0C1T1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.76■□□□□ 0.91
Hoxb2P0C1T1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxb2P0C1T1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.75■□□□□ 0.91
Hoxb2P0C1T1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxb2P0C1T1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hoxb2P0C1T1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hoxb2P0C1T1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hoxb2P0C1T1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Hoxb2P0C1T1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxb2P0C1T1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hoxb2P0C1T1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.72■□□□□ 0.91
Hoxb2P0C1T1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb2P0C1T1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxb2P0C1T1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Hoxb2P0C1T1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxb2P0C1T1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb2P0C1T1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxb2P0C1T1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hoxb2P0C1T1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb2P0C1T1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb2P0C1T1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb2P0C1T1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.68■□□□□ 0.9
Hoxb2P0C1T1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxb2P0C1T1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxb2P0C1T1 Particl-201ENSMUST00000205370 1560 ntBASIC20.67■□□□□ 0.9
Hoxb2P0C1T1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Hoxb2P0C1T1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.65■□□□□ 0.9
Hoxb2P0C1T1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms