Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
P01800 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
P01800 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.85■□□□□ 0.93
P01800 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
P01800 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
P01800 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.84■□□□□ 0.93
P01800 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
P01800 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01800 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01800 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
P01800 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
P01800 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
P01800 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
P01800 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
P01800 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P01800 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P01800 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.79■□□□□ 0.92
P01800 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P01800 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
P01800 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
P01800 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01800 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01800 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
P01800 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
P01800 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01800 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
P01800 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01800 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
P01800 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P01800 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01800 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
P01800 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
P01800 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.75■□□□□ 0.91
P01800 Gm45855-201ENSMUST00000212546 880 ntBASIC20.74■□□□□ 0.91
P01800 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
P01800 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
P01800 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
P01800 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.71■□□□□ 0.91
P01800 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P01800 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
P01800 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
P01800 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01800 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
P01800 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
P01800 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01800 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.68■□□□□ 0.9
P01800 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01800 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01800 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01800 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01800 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01800 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01800 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01800 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
P01800 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P01800 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P01800 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P01800 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
P01800 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
P01800 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01800 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01800 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01800 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01800 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.63■□□□□ 0.89
P01800 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01800 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01800 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01800 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01800 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01800 Gm9397-201ENSMUST00000200125 605 ntBASIC20.61■□□□□ 0.89
P01800 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
P01800 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01800 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01800 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01800 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
P01800 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P01800 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P01800 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01800 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01800 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01800 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01800 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.55■□□□□ 0.88
P01800 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.55■□□□□ 0.88
P01800 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01800 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
P01800 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01800 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01800 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.54■□□□□ 0.88
P01800 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P01800 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.53■□□□□ 0.88
P01800 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01800 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01800 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P01800 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01800 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01800 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01800 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01800 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.52■□□□□ 0.88
P01800 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01800 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms