Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav19A0A0B4J1K4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav19A0A0B4J1K4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav19A0A0B4J1K4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav19A0A0B4J1K4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.76■□□□□ 0.43
Trav19A0A0B4J1K4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav19A0A0B4J1K4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav19A0A0B4J1K4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav19A0A0B4J1K4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav19A0A0B4J1K4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav19A0A0B4J1K4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav19A0A0B4J1K4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav19A0A0B4J1K4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trav19A0A0B4J1K4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav19A0A0B4J1K4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav19A0A0B4J1K4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav19A0A0B4J1K4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav19A0A0B4J1K4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav19A0A0B4J1K4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav19A0A0B4J1K4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav19A0A0B4J1K4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav19A0A0B4J1K4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav19A0A0B4J1K4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav19A0A0B4J1K4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav19A0A0B4J1K4 Gm16148-201ENSMUST00000119653 893 ntBASIC17.69■□□□□ 0.42
Trav19A0A0B4J1K4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav19A0A0B4J1K4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav19A0A0B4J1K4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav19A0A0B4J1K4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav19A0A0B4J1K4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trav19A0A0B4J1K4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav19A0A0B4J1K4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav19A0A0B4J1K4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav19A0A0B4J1K4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav19A0A0B4J1K4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav19A0A0B4J1K4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav19A0A0B4J1K4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav19A0A0B4J1K4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav19A0A0B4J1K4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav19A0A0B4J1K4 Gm24804-201ENSMUST00000174982 85 ntBASIC17.64■□□□□ 0.41
Trav19A0A0B4J1K4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav19A0A0B4J1K4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav19A0A0B4J1K4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav19A0A0B4J1K4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav19A0A0B4J1K4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav19A0A0B4J1K4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav19A0A0B4J1K4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav19A0A0B4J1K4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav19A0A0B4J1K4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav19A0A0B4J1K4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav19A0A0B4J1K4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav19A0A0B4J1K4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav19A0A0B4J1K4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Trav19A0A0B4J1K4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav19A0A0B4J1K4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav19A0A0B4J1K4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav19A0A0B4J1K4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav19A0A0B4J1K4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav19A0A0B4J1K4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav19A0A0B4J1K4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav19A0A0B4J1K4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav19A0A0B4J1K4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav19A0A0B4J1K4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav19A0A0B4J1K4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav19A0A0B4J1K4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav19A0A0B4J1K4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav19A0A0B4J1K4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav19A0A0B4J1K4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav19A0A0B4J1K4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav19A0A0B4J1K4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms