Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.37■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.33■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-18A0A0A6YXN4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ighv1-18A0A0A6YXN4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.33■□□□□ 0.68
Ighv1-18A0A0A6YXN4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.32■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Gm24970-201ENSMUST00000175582 82 ntBASIC19.3■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.3■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-18A0A0A6YXN4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.27■□□□□ 0.68
Ighv1-18A0A0A6YXN4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.26■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-18A0A0A6YXN4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ighv1-18A0A0A6YXN4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.22■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ighv1-18A0A0A6YXN4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-18A0A0A6YXN4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.2■□□□□ 0.66
Ighv1-18A0A0A6YXN4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-18A0A0A6YXN4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-18A0A0A6YXN4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ighv1-18A0A0A6YXN4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-18A0A0A6YXN4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ighv1-18A0A0A6YXN4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ighv1-18A0A0A6YXN4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms