Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trdv1A0A075B657 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trdv1A0A075B657 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.14■□□□□ 0.49
Trdv1A0A075B657 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trdv1A0A075B657 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trdv1A0A075B657 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trdv1A0A075B657 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Trdv1A0A075B657 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.11■□□□□ 0.49
Trdv1A0A075B657 Gm16148-201ENSMUST00000119653 893 ntBASIC18.11■□□□□ 0.49
Trdv1A0A075B657 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trdv1A0A075B657 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trdv1A0A075B657 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trdv1A0A075B657 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdv1A0A075B657 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdv1A0A075B657 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdv1A0A075B657 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trdv1A0A075B657 Gm24804-201ENSMUST00000174982 85 ntBASIC18.08■□□□□ 0.48
Trdv1A0A075B657 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trdv1A0A075B657 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trdv1A0A075B657 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv1A0A075B657 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv1A0A075B657 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trdv1A0A075B657 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trdv1A0A075B657 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trdv1A0A075B657 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trdv1A0A075B657 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trdv1A0A075B657 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdv1A0A075B657 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdv1A0A075B657 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trdv1A0A075B657 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trdv1A0A075B657 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.03■□□□□ 0.48
Trdv1A0A075B657 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Trdv1A0A075B657 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trdv1A0A075B657 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdv1A0A075B657 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trdv1A0A075B657 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trdv1A0A075B657 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trdv1A0A075B657 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18■□□□□ 0.47
Trdv1A0A075B657 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trdv1A0A075B657 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdv1A0A075B657 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Trdv1A0A075B657 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trdv1A0A075B657 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trdv1A0A075B657 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trdv1A0A075B657 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdv1A0A075B657 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdv1A0A075B657 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trdv1A0A075B657 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trdv1A0A075B657 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trdv1A0A075B657 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trdv1A0A075B657 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trdv1A0A075B657 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Trdv1A0A075B657 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trdv1A0A075B657 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.94■□□□□ 0.46
Trdv1A0A075B657 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trdv1A0A075B657 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trdv1A0A075B657 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trdv1A0A075B657 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trdv1A0A075B657 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trdv1A0A075B657 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv1A0A075B657 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdv1A0A075B657 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms