Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Ighv3-1A0A075B5S6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv3-1A0A075B5S6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv3-1A0A075B5S6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv3-1A0A075B5S6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv3-1A0A075B5S6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv3-1A0A075B5S6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
Ighv3-1A0A075B5S6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv3-1A0A075B5S6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv3-1A0A075B5S6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Ighv3-1A0A075B5S6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ighv3-1A0A075B5S6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv3-1A0A075B5S6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv3-1A0A075B5S6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.1■□□□□ 0.65
Ighv3-1A0A075B5S6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ighv3-1A0A075B5S6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
Ighv3-1A0A075B5S6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.09■□□□□ 0.65
Ighv3-1A0A075B5S6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv3-1A0A075B5S6 Amer2-203ENSMUST00000225247 2662 ntBASIC19.09■□□□□ 0.65
Ighv3-1A0A075B5S6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv3-1A0A075B5S6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv3-1A0A075B5S6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.07■□□□□ 0.64
Ighv3-1A0A075B5S6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ighv3-1A0A075B5S6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.06■□□□□ 0.64
Ighv3-1A0A075B5S6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.06■□□□□ 0.64
Ighv3-1A0A075B5S6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ighv3-1A0A075B5S6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Ighv3-1A0A075B5S6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ighv3-1A0A075B5S6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ighv3-1A0A075B5S6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Ighv3-1A0A075B5S6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv3-1A0A075B5S6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv3-1A0A075B5S6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv3-1A0A075B5S6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv3-1A0A075B5S6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.03■□□□□ 0.64
Ighv3-1A0A075B5S6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv3-1A0A075B5S6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.03■□□□□ 0.64
Ighv3-1A0A075B5S6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.03■□□□□ 0.64
Ighv3-1A0A075B5S6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.02■□□□□ 0.64
Ighv3-1A0A075B5S6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.02■□□□□ 0.64
Ighv3-1A0A075B5S6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.01■□□□□ 0.63
Ighv3-1A0A075B5S6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19■□□□□ 0.63
Ighv3-1A0A075B5S6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-1A0A075B5S6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ighv3-1A0A075B5S6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv3-1A0A075B5S6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv3-1A0A075B5S6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv3-1A0A075B5S6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ighv3-1A0A075B5S6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-1A0A075B5S6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-1A0A075B5S6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.96■□□□□ 0.63
Ighv3-1A0A075B5S6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-1A0A075B5S6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv3-1A0A075B5S6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv3-1A0A075B5S6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv3-1A0A075B5S6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv3-1A0A075B5S6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-1A0A075B5S6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv3-1A0A075B5S6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ighv3-1A0A075B5S6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.93■□□□□ 0.62
Ighv3-1A0A075B5S6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ighv3-1A0A075B5S6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.92■□□□□ 0.62
Ighv3-1A0A075B5S6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.92■□□□□ 0.62
Ighv3-1A0A075B5S6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.92■□□□□ 0.62
Ighv3-1A0A075B5S6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.92■□□□□ 0.62
Ighv3-1A0A075B5S6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv3-1A0A075B5S6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv3-1A0A075B5S6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv3-1A0A075B5S6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv3-1A0A075B5S6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ighv3-1A0A075B5S6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ighv3-1A0A075B5S6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ighv3-1A0A075B5S6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-1A0A075B5S6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-1A0A075B5S6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-1A0A075B5S6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-1A0A075B5S6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv3-1A0A075B5S6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv3-1A0A075B5S6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv3-1A0A075B5S6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.88■□□□□ 0.61
Ighv3-1A0A075B5S6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv3-1A0A075B5S6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.87■□□□□ 0.61
Ighv3-1A0A075B5S6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.87■□□□□ 0.61
Ighv3-1A0A075B5S6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv3-1A0A075B5S6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv3-1A0A075B5S6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv3-1A0A075B5S6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv3-1A0A075B5S6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv3-1A0A075B5S6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms