Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM56-RWDD3S4R434 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 AC105265.2-201ENST00000467189 838 ntBASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 AF213884.3-201ENST00000563833 479 ntBASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM56-RWDD3S4R434 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 RBM17P2-201ENST00000616397 1405 ntBASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 AC096631.2-201ENST00000436136 790 ntBASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 AP001160.3-201ENST00000601484 763 ntBASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM56-RWDD3S4R434 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PGM5P4-201ENST00000421970 445 ntBASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 AL136967.2-201ENST00000623968 743 ntBASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TMEM56-RWDD3S4R434 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM56-RWDD3S4R434 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms