Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 YLR222C-AYLR222C-A 231 nt-0.04□□□□□ -2.42
RRP40Q08285 snR45snR45 172 nt-0.04□□□□□ -2.42
RRP40Q08285 MYO1YHR023W 5787 nt-0.04□□□□□ -2.42
RRP40Q08285 YDR366CYDR366C 399 nt-0.06□□□□□ -2.42
RRP40Q08285 YJL197C-AYJL197C-A 282 nt-0.06□□□□□ -2.42
RRP40Q08285 YPR016W-AYPR016W-A 261 nt-0.06□□□□□ -2.42
RRP40Q08285 SOV1YMR066W 2697 nt-0.07□□□□□ -2.42
RRP40Q08285 snR60snR60 104 nt-0.07□□□□□ -2.42
RRP40Q08285 SNU13YEL026W 381 nt-0.07□□□□□ -2.42
RRP40Q08285 YLL019W-AYLL019W-A 93 nt-0.07□□□□□ -2.42
RRP40Q08285 YGR069WYGR069W 336 nt-0.08□□□□□ -2.42
RRP40Q08285 HTL1YCR020W-B 237 nt-0.1□□□□□ -2.43
RRP40Q08285 YLR232WYLR232W 348 nt-0.1□□□□□ -2.43
RRP40Q08285 YDR157WYDR157W 402 nt-0.11□□□□□ -2.43
RRP40Q08285 YIL032CYIL032C 357 nt-0.12□□□□□ -2.43
RRP40Q08285 Q0144Q0144 330 nt-0.14□□□□□ -2.43
RRP40Q08285 YDR102CYDR102C 333 nt-0.15□□□□□ -2.43
RRP40Q08285 YER053C-AYER053C-A 114 nt-0.15□□□□□ -2.43
RRP40Q08285 YBR072C-AYBR072C-A 162 nt-0.15□□□□□ -2.43
RRP40Q08285 VAR1Q0140 1197 nt-0.16□□□□□ -2.44
RRP40Q08285 YMR193C-AYMR193C-A 387 nt-0.16□□□□□ -2.44
RRP40Q08285 YNL028WYNL028W 318 nt-0.17□□□□□ -2.44
RRP40Q08285 YOR072W-BYOR072W-B 162 nt-0.17□□□□□ -2.44
RRP40Q08285 UTP8YGR128C 2142 nt-0.18□□□□□ -2.44
RRP40Q08285 YMR158W-BYMR158W-B 321 nt-0.18□□□□□ -2.44
RRP40Q08285 YDR183C-AYDR183C-A 258 nt-0.19□□□□□ -2.44
RRP40Q08285 YAF9YNL107W 681 nt-0.19□□□□□ -2.44
RRP40Q08285 snR128snR128 126 nt-0.2□□□□□ -2.44
RRP40Q08285 PRP39YML046W 1890 nt-0.2□□□□□ -2.44
RRP40Q08285 YDR118W-AYDR118W-A 117 nt-0.21□□□□□ -2.44
RRP40Q08285 YDR210WYDR210W 228 nt-0.21□□□□□ -2.44
RRP40Q08285 snR8snR8 190 nt-0.22□□□□□ -2.44
RRP40Q08285 HMRA1YCR097W 381 nt-0.23□□□□□ -2.45
RRP40Q08285 YGL149WYGL149W 306 nt-0.23□□□□□ -2.45
RRP40Q08285 YOR015WYOR015W 360 nt-0.23□□□□□ -2.45
RRP40Q08285 GLG1YKR058W 1851 nt-0.24□□□□□ -2.45
RRP40Q08285 YBR099CYBR099C 384 nt-0.24□□□□□ -2.45
RRP40Q08285 YIL002W-AYIL002W-A 210 nt-0.25□□□□□ -2.45
RRP40Q08285 YLR120W-AYLR120W-A 102 nt-0.26□□□□□ -2.45
RRP40Q08285 YCR038W-AYCR038W-A 126 nt-0.27□□□□□ -2.45
RRP40Q08285 SDH6YDR379C-A 240 nt-0.27□□□□□ -2.45
RRP40Q08285 snR36snR36 182 nt-0.27□□□□□ -2.45
RRP40Q08285 CSE1YGL238W 2883 nt-0.28□□□□□ -2.45
RRP40Q08285 ATP6Q0085 780 nt-0.28□□□□□ -2.45
RRP40Q08285 YPL038W-AYPL038W-A 192 nt-0.28□□□□□ -2.45
RRP40Q08285 TFB5YDR079C-A 219 nt-0.29□□□□□ -2.46
RRP40Q08285 YPR197CYPR197C 564 nt-0.29□□□□□ -2.46
RRP40Q08285 snR74snR74 88 nt-0.31□□□□□ -2.46
RRP40Q08285 SBH2YER019C-A 267 nt-0.31□□□□□ -2.46
RRP40Q08285 APQ12YIL040W 417 nt-0.31□□□□□ -2.46
RRP40Q08285 YMR172C-AYMR172C-A 384 nt-0.31□□□□□ -2.46
RRP40Q08285 YPR170W-AYPR170W-A 186 nt-0.31□□□□□ -2.46
RRP40Q08285 EST1YLR233C 2100 nt-0.32□□□□□ -2.46
RRP40Q08285 YPR012WYPR012W 255 nt-0.33□□□□□ -2.46
RRP40Q08285 RAD61YDR014W 1944 nt-0.33□□□□□ -2.46
RRP40Q08285 YFL032WYFL032W 321 nt-0.35□□□□□ -2.47
RRP40Q08285 TAH1YCR060W 336 nt-0.36□□□□□ -2.47
RRP40Q08285 YGL052WYGL052W 306 nt-0.36□□□□□ -2.47
RRP40Q08285 YFL019CYFL019C 354 nt-0.37□□□□□ -2.47
RRP40Q08285 YGR164WYGR164W 336 nt-0.37□□□□□ -2.47
RRP40Q08285 snR46snR46 197 nt-0.37□□□□□ -2.47
RRP40Q08285 YDL240C-AYDL240C-A 138 nt-0.38□□□□□ -2.47
RRP40Q08285 YPL060C-AYPL060C-A 3315 nt-0.39□□□□□ -2.47
RRP40Q08285 YDR544CYDR544C 429 nt-0.39□□□□□ -2.47
RRP40Q08285 SEC10YLR166C 2616 nt-0.39□□□□□ -2.47
RRP40Q08285 RPM2YML091C 3609 nt-0.4□□□□□ -2.47
RRP40Q08285 COG6YNL041C 2520 nt-0.41□□□□□ -2.47
RRP40Q08285 YIR030W-AYIR030W-A 384 nt-0.41□□□□□ -2.48
RRP40Q08285 RPL39YJL189W 156 nt-0.43□□□□□ -2.48
RRP40Q08285 YOR008C-AYOR008C-A 225 nt-0.43□□□□□ -2.48
RRP40Q08285 YKL118WYKL118W 312 nt-0.44□□□□□ -2.48
RRP40Q08285 YDR413CYDR413C 576 nt-0.45□□□□□ -2.48
RRP40Q08285 YBL039C-AYBL039C-A 84 nt-0.45□□□□□ -2.48
RRP40Q08285 YER097WYER097W 330 nt-0.47□□□□□ -2.48
RRP40Q08285 YOR314W-AYOR314W-A 111 nt-0.48□□□□□ -2.49
RRP40Q08285 YJL113WYJL113W 4647 nt-0.48□□□□□ -2.49
RRP40Q08285 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
RRP40Q08285 YBR182C-AYBR182C-A 195 nt-0.53□□□□□ -2.49
RRP40Q08285 tF(GAA)QtF(GAA)Q 75 nt-0.55□□□□□ -2.5
RRP40Q08285 GIM4YEL003W 336 nt-0.55□□□□□ -2.5
RRP40Q08285 YGL041CYGL041C 204 nt-0.55□□□□□ -2.5
RRP40Q08285 YML099W-AYML099W-A 330 nt-0.55□□□□□ -2.5
RRP40Q08285 YGL182CYGL182C 324 nt-0.56□□□□□ -2.5
RRP40Q08285 YIL071W-AYIL071W-A 477 nt-0.56□□□□□ -2.5
RRP40Q08285 YNL277W-AYNL277W-A 189 nt-0.56□□□□□ -2.5
RRP40Q08285 YPR010C-AYPR010C-A 219 nt-0.59□□□□□ -2.5
RRP40Q08285 YER181CYER181C 324 nt-0.62□□□□□ -2.51
RRP40Q08285 YML100W-AYML100W-A 174 nt-0.62□□□□□ -2.51
RRP40Q08285 YJL077W-AYJL077W-A 87 nt-0.64□□□□□ -2.51
RRP40Q08285 YDL007C-AYDL007C-A 258 nt-0.66□□□□□ -2.52
RRP40Q08285 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
RRP40Q08285 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
RRP40Q08285 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
RRP40Q08285 PAU9YBL108C-A 129 nt-0.66□□□□□ -2.52
RRP40Q08285 YBR131C-AYBR131C-A 90 nt-0.66□□□□□ -2.52
RRP40Q08285 snR55snR55 98 nt-0.67□□□□□ -2.52
RRP40Q08285 YEL014CYEL014C 306 nt-0.67□□□□□ -2.52
RRP40Q08285 YOR381W-AYOR381W-A 168 nt-0.68□□□□□ -2.52
RRP40Q08285 tA(UGC)QtA(UGC)Q 76 nt-0.69□□□□□ -2.52
RRP40Q08285 YJL182CYJL182C 318 nt-0.69□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms