Protein–RNA interactions for Protein: Q04007

SND1, SRP-independent targeting protein 1, yeastyeast

Predictions only

Length 877 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SND1Q04007 RPL26BYGR034W 384 nt1.28□□□□□ -2.2
SND1Q04007 YIL002W-AYIL002W-A 210 nt1.28□□□□□ -2.2
SND1Q04007 YAL067W-AYAL067W-A 228 nt1.28□□□□□ -2.2
SND1Q04007 YER053C-AYER053C-A 114 nt1.27□□□□□ -2.21
SND1Q04007 YOR102WYOR102W 351 nt1.27□□□□□ -2.21
SND1Q04007 YNL205CYNL205C 423 nt1.26□□□□□ -2.21
SND1Q04007 SNU13YEL026W 381 nt1.25□□□□□ -2.21
SND1Q04007 PRP5YBR237W 2550 nt1.24□□□□□ -2.21
SND1Q04007 YGL123C-AYGL123C-A 231 nt1.24□□□□□ -2.21
SND1Q04007 tV(UAC)BtV(UAC)B 74 nt1.24□□□□□ -2.21
SND1Q04007 tV(UAC)DtV(UAC)D 74 nt1.24□□□□□ -2.21
SND1Q04007 YOR161W-AYOR161W-A 81 nt1.24□□□□□ -2.21
SND1Q04007 GEA2YEL022W 4380 nt1.24□□□□□ -2.21
SND1Q04007 UTP20YBL004W 7482 nt1.22□□□□□ -2.21
SND1Q04007 snR85snR85 171 nt1.21□□□□□ -2.22
SND1Q04007 YOR314W-AYOR314W-A 111 nt1.21□□□□□ -2.22
SND1Q04007 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
SND1Q04007 SIP4YJL089W 2490 nt1.21□□□□□ -2.22
SND1Q04007 YFR012W-AYFR012W-A 87 nt1.2□□□□□ -2.22
SND1Q04007 tL(UAA)QtL(UAA)Q 85 nt1.2□□□□□ -2.22
SND1Q04007 PRP16YKR086W 3216 nt1.2□□□□□ -2.22
SND1Q04007 YCL001W-BYCL001W-B 255 nt1.19□□□□□ -2.22
SND1Q04007 BFR2YDR299W 1605 nt1.18□□□□□ -2.22
SND1Q04007 SEC8YPR055W 3198 nt1.18□□□□□ -2.22
SND1Q04007 SPT7YBR081C 3999 nt1.18□□□□□ -2.22
SND1Q04007 YKL100W-AYKL100W-A 90 nt1.18□□□□□ -2.22
SND1Q04007 YLR282CYLR282C 342 nt1.18□□□□□ -2.22
SND1Q04007 UTP8YGR128C 2142 nt1.18□□□□□ -2.22
SND1Q04007 YGL182CYGL182C 324 nt1.17□□□□□ -2.22
SND1Q04007 LTE1YAL024C 4308 nt1.17□□□□□ -2.22
SND1Q04007 DOP1YDR141C 5097 nt1.17□□□□□ -2.22
SND1Q04007 COX5BYIL111W 456 nt1.16□□□□□ -2.22
SND1Q04007 BEM2YER155C 6504 nt1.16□□□□□ -2.22
SND1Q04007 BUD3YCL014W 4911 nt1.15□□□□□ -2.23
SND1Q04007 YBL039C-AYBL039C-A 84 nt1.14□□□□□ -2.23
SND1Q04007 TAH1YCR060W 336 nt1.13□□□□□ -2.23
SND1Q04007 YOR329W-AYOR329W-A 210 nt1.13□□□□□ -2.23
SND1Q04007 CHS6YJL099W 2241 nt1.13□□□□□ -2.23
SND1Q04007 ASE1YOR058C 2658 nt1.12□□□□□ -2.23
SND1Q04007 YML002WYML002W 2214 nt1.12□□□□□ -2.23
SND1Q04007 YLR399W-AYLR399W-A 105 nt1.12□□□□□ -2.23
SND1Q04007 YPR117WYPR117W 7470 nt1.11□□□□□ -2.23
SND1Q04007 snR190snR190 190 nt1.11□□□□□ -2.23
SND1Q04007 YDL073WYDL073W 2955 nt1.11□□□□□ -2.23
SND1Q04007 FYV10YIL097W 1551 nt1.1□□□□□ -2.23
SND1Q04007 PAU12YGR294W 363 nt1.08□□□□□ -2.24
SND1Q04007 YIL071W-AYIL071W-A 477 nt1.08□□□□□ -2.24
SND1Q04007 YPR160W-AYPR160W-A 81 nt1.08□□□□□ -2.24
SND1Q04007 PAU24YBR301W 363 nt1.08□□□□□ -2.24
SND1Q04007 YDR544CYDR544C 429 nt1.07□□□□□ -2.24
SND1Q04007 QCR9YGR183C 201 nt1.07□□□□□ -2.24
SND1Q04007 YLR041WYLR041W 321 nt1.07□□□□□ -2.24
SND1Q04007 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SND1Q04007 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
SND1Q04007 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
SND1Q04007 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
SND1Q04007 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
SND1Q04007 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
SND1Q04007 YNL067W-BYNL067W-B 141 nt1.06□□□□□ -2.24
SND1Q04007 snR39BsnR39B 96 nt1.06□□□□□ -2.24
SND1Q04007 YCR095W-AYCR095W-A 159 nt1.05□□□□□ -2.24
SND1Q04007 OST4YDL232W 111 nt1.04□□□□□ -2.24
SND1Q04007 YBR099CYBR099C 384 nt1.04□□□□□ -2.24
SND1Q04007 YHR131W-AYHR131W-A 246 nt1.03□□□□□ -2.24
SND1Q04007 YLR232WYLR232W 348 nt1.03□□□□□ -2.24
SND1Q04007 YSP1YHR155W 3687 nt1.01□□□□□ -2.25
SND1Q04007 SOM1YEL059C-A 225 nt1.01□□□□□ -2.25
SND1Q04007 BEM3YPL115C 3387 nt1.01□□□□□ -2.25
SND1Q04007 PMP2YEL017C-A 132 nt1□□□□□ -2.25
SND1Q04007 tM(CAU)Q2tM(CAU)Q2 78 nt1□□□□□ -2.25
SND1Q04007 tN(GUU)QtN(GUU)Q 71 nt1□□□□□ -2.25
SND1Q04007 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
SND1Q04007 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
SND1Q04007 MYO1YHR023W 5787 nt0.98□□□□□ -2.25
SND1Q04007 YNL103W-AYNL103W-A 90 nt0.97□□□□□ -2.25
SND1Q04007 BIR1YJR089W 2865 nt0.97□□□□□ -2.25
SND1Q04007 YDR210WYDR210W 228 nt0.96□□□□□ -2.26
SND1Q04007 RPM2YML091C 3609 nt0.96□□□□□ -2.26
SND1Q04007 tF(GAA)BtF(GAA)B 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)FtF(GAA)F 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)GtF(GAA)G 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)H1tF(GAA)H1 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)H2tF(GAA)H2 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)MtF(GAA)M 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)P1tF(GAA)P1 73 nt0.95□□□□□ -2.26
SND1Q04007 tF(GAA)P2tF(GAA)P2 73 nt0.95□□□□□ -2.26
SND1Q04007 COG6YNL041C 2520 nt0.94□□□□□ -2.26
SND1Q04007 SEC1YDR164C 2175 nt0.94□□□□□ -2.26
SND1Q04007 YJL127W-AYJL127W-A 117 nt0.93□□□□□ -2.26
SND1Q04007 YBL109WYBL109W 336 nt0.93□□□□□ -2.26
SND1Q04007 TFB5YDR079C-A 219 nt0.92□□□□□ -2.26
SND1Q04007 YDR524C-AYDR524C-A 120 nt0.91□□□□□ -2.26
SND1Q04007 IQG1YPL242C 4488 nt0.9□□□□□ -2.26
SND1Q04007 RKR1YMR247C 4689 nt0.9□□□□□ -2.27
SND1Q04007 RCO1YMR075W 2055 nt0.88□□□□□ -2.27
SND1Q04007 MLP1YKR095W 5628 nt0.87□□□□□ -2.27
SND1Q04007 snR61snR61 90 nt0.86□□□□□ -2.27
SND1Q04007 YGR146C-AYGR146C-A 162 nt0.86□□□□□ -2.27
SND1Q04007 YIL142C-AYIL142C-A 333 nt0.85□□□□□ -2.27
SND1Q04007 YBR072C-AYBR072C-A 162 nt0.85□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 37.9 ms