Protein–RNA interactions for Protein: Q00916

SNP1, U1 small nuclear ribonucleoprotein 70 kDa homolog, yeastyeast

Predicted RBP Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNP1Q00916 KAP120YPL125W 3099 nt1.37□□□□□ -2.19
SNP1Q00916 LAA1YJL207C 6045 nt1.36□□□□□ -2.19
SNP1Q00916 YBL039C-AYBL039C-A 84 nt1.35□□□□□ -2.19
SNP1Q00916 YOR314W-AYOR314W-A 111 nt1.34□□□□□ -2.19
SNP1Q00916 SEC8YPR055W 3198 nt1.34□□□□□ -2.2
SNP1Q00916 TAH1YCR060W 336 nt1.33□□□□□ -2.2
SNP1Q00916 CCH1YGR217W 6120 nt1.32□□□□□ -2.2
SNP1Q00916 YGR130CYGR130C 2451 nt1.31□□□□□ -2.2
SNP1Q00916 CHS6YJL099W 2241 nt1.3□□□□□ -2.2
SNP1Q00916 tL(UAA)QtL(UAA)Q 85 nt1.3□□□□□ -2.2
SNP1Q00916 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
SNP1Q00916 RAD9YDR217C 3930 nt1.29□□□□□ -2.2
SNP1Q00916 PRP16YKR086W 3216 nt1.29□□□□□ -2.2
SNP1Q00916 PAU12YGR294W 363 nt1.28□□□□□ -2.2
SNP1Q00916 YLR232WYLR232W 348 nt1.28□□□□□ -2.2
SNP1Q00916 YLR399W-AYLR399W-A 105 nt1.28□□□□□ -2.2
SNP1Q00916 PAU24YBR301W 363 nt1.28□□□□□ -2.2
SNP1Q00916 PIK1YNL267W 3201 nt1.27□□□□□ -2.21
SNP1Q00916 IML1YJR138W 4755 nt1.27□□□□□ -2.21
SNP1Q00916 YPR160W-AYPR160W-A 81 nt1.27□□□□□ -2.21
SNP1Q00916 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
SNP1Q00916 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
SNP1Q00916 FYV8YGR196C 2454 nt1.25□□□□□ -2.21
SNP1Q00916 YHR131W-AYHR131W-A 246 nt1.24□□□□□ -2.21
SNP1Q00916 YOR329W-AYOR329W-A 210 nt1.23□□□□□ -2.21
SNP1Q00916 SPT7YBR081C 3999 nt1.22□□□□□ -2.21
SNP1Q00916 tN(GUU)QtN(GUU)Q 71 nt1.21□□□□□ -2.22
SNP1Q00916 YDR544CYDR544C 429 nt1.2□□□□□ -2.22
SNP1Q00916 NST1YNL091W 3723 nt1.2□□□□□ -2.22
SNP1Q00916 PET127YOR017W 2403 nt1.19□□□□□ -2.22
SNP1Q00916 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
SNP1Q00916 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
SNP1Q00916 QCR9YGR183C 201 nt1.17□□□□□ -2.22
SNP1Q00916 BEM3YPL115C 3387 nt1.17□□□□□ -2.22
SNP1Q00916 tQ(UUG)E2tQ(UUG)E2 72 nt1.16□□□□□ -2.22
SNP1Q00916 YNL067W-BYNL067W-B 141 nt1.16□□□□□ -2.22
SNP1Q00916 tM(CAU)Q2tM(CAU)Q2 78 nt1.15□□□□□ -2.23
SNP1Q00916 YCL001W-BYCL001W-B 255 nt1.15□□□□□ -2.23
SNP1Q00916 YSP1YHR155W 3687 nt1.15□□□□□ -2.23
SNP1Q00916 snR39BsnR39B 96 nt1.14□□□□□ -2.23
SNP1Q00916 UBP3YER151C 2739 nt1.14□□□□□ -2.23
SNP1Q00916 YDL073WYDL073W 2955 nt1.12□□□□□ -2.23
SNP1Q00916 COG6YNL041C 2520 nt1.12□□□□□ -2.23
SNP1Q00916 SIP4YJL089W 2490 nt1.12□□□□□ -2.23
SNP1Q00916 RPM2YML091C 3609 nt1.11□□□□□ -2.23
SNP1Q00916 SCC2YDR180W 4482 nt1.11□□□□□ -2.23
SNP1Q00916 OST4YDL232W 111 nt1.1□□□□□ -2.23
SNP1Q00916 YNL284C-BYNL284C-B 5268 nt1.08□□□□□ -2.24
SNP1Q00916 RKR1YMR247C 4689 nt1.08□□□□□ -2.24
SNP1Q00916 YDR210WYDR210W 228 nt1.07□□□□□ -2.24
SNP1Q00916 YCR095W-AYCR095W-A 159 nt1.06□□□□□ -2.24
SNP1Q00916 SOM1YEL059C-A 225 nt1.05□□□□□ -2.24
SNP1Q00916 SEC1YDR164C 2175 nt1.05□□□□□ -2.24
SNP1Q00916 Q0143Q0143 153 nt1.04□□□□□ -2.24
SNP1Q00916 YJL127W-AYJL127W-A 117 nt1.04□□□□□ -2.24
SNP1Q00916 YBR072C-AYBR072C-A 162 nt1.04□□□□□ -2.24
SNP1Q00916 tF(GAA)BtF(GAA)B 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)FtF(GAA)F 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)GtF(GAA)G 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)H1tF(GAA)H1 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)H2tF(GAA)H2 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)MtF(GAA)M 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)P1tF(GAA)P1 73 nt1.03□□□□□ -2.24
SNP1Q00916 tF(GAA)P2tF(GAA)P2 73 nt1.03□□□□□ -2.24
SNP1Q00916 ULP2YIL031W 3105 nt1.02□□□□□ -2.25
SNP1Q00916 YIL071W-AYIL071W-A 477 nt1.02□□□□□ -2.25
SNP1Q00916 GLG1YKR058W 1851 nt1.01□□□□□ -2.25
SNP1Q00916 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
SNP1Q00916 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
SNP1Q00916 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
SNP1Q00916 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
SNP1Q00916 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
SNP1Q00916 YGR146C-AYGR146C-A 162 nt1.01□□□□□ -2.25
SNP1Q00916 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
SNP1Q00916 YBR099CYBR099C 384 nt0.99□□□□□ -2.25
SNP1Q00916 YLL006W-AYLL006W-A 177 nt0.97□□□□□ -2.25
SNP1Q00916 NNF2YGR089W 2811 nt0.97□□□□□ -2.25
SNP1Q00916 BUD3YCL014W 4911 nt0.97□□□□□ -2.25
SNP1Q00916 LTE1YAL024C 4308 nt0.92□□□□□ -2.26
SNP1Q00916 YJR029WYJR029W 5268 nt0.92□□□□□ -2.26
SNP1Q00916 YPR137C-BYPR137C-B 5268 nt0.92□□□□□ -2.26
SNP1Q00916 YNL205CYNL205C 423 nt0.92□□□□□ -2.26
SNP1Q00916 VAM6YDL077C 3150 nt0.92□□□□□ -2.26
SNP1Q00916 snR85snR85 171 nt0.91□□□□□ -2.26
SNP1Q00916 YOL014WYOL014W 375 nt0.9□□□□□ -2.27
SNP1Q00916 YOR192C-BYOR192C-B 5313 nt0.89□□□□□ -2.27
SNP1Q00916 BIR1YJR089W 2865 nt0.88□□□□□ -2.27
SNP1Q00916 UTP20YBL004W 7482 nt0.86□□□□□ -2.27
SNP1Q00916 NIP1YMR309C 2439 nt0.86□□□□□ -2.27
SNP1Q00916 DOP1YDR141C 5097 nt0.86□□□□□ -2.27
SNP1Q00916 BUL2YML111W 2763 nt0.85□□□□□ -2.27
SNP1Q00916 PET111YMR257C 2403 nt0.85□□□□□ -2.27
SNP1Q00916 CSE1YGL238W 2883 nt0.85□□□□□ -2.27
SNP1Q00916 PMP2YEL017C-A 132 nt0.83□□□□□ -2.28
SNP1Q00916 RPS26AYGL189C 360 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms