Protein–RNA interactions for Protein: P89113

DDR2, Protein DDR2, yeast

Predictions only

Length 61 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
DDR2	P89113	tQ(UUG)Q	tQ(UUG)Q	76 nt		-3.12	□□□□□ -2.91
DDR2	P89113	BI2	Q0110	1272 nt		-3.13	□□□□□ -2.91
DDR2	P89113	YOL166W-A	YOL166W-A	156 nt		-3.14	□□□□□ -2.91
DDR2	P89113	YLR456W	YLR456W	615 nt		-3.15	□□□□□ -2.91
DDR2	P89113	YAR029W	YAR029W	225 nt		-3.17	□□□□□ -2.92
DDR2	P89113	YLR334C	YLR334C	381 nt		-3.17	□□□□□ -2.92
DDR2	P89113	YNL266W	YNL266W	420 nt		-3.17	□□□□□ -2.92
DDR2	P89113	RPS30A	YLR287C-A	192 nt		-3.19	□□□□□ -2.92
DDR2	P89113	YAF9	YNL107W	681 nt		-3.19	□□□□□ -2.92
DDR2	P89113	YNL146C-A	YNL146C-A	195 nt		-3.19	□□□□□ -2.92
DDR2	P89113	YNL303W	YNL303W	348 nt		-3.19	□□□□□ -2.92
DDR2	P89113	YLR202C	YLR202C	327 nt		-3.21	□□□□□ -2.92
DDR2	P89113	YER090C-A	YER090C-A	90 nt		-3.22	□□□□□ -2.92
DDR2	P89113	YML054C-A	YML054C-A	159 nt		-3.22	□□□□□ -2.92
DDR2	P89113	YIR021W-A	YIR021W-A	213 nt		-3.23	□□□□□ -2.93
DDR2	P89113	YFL012W	YFL012W	447 nt		-3.24	□□□□□ -2.93
DDR2	P89113	YMR013C-A	YMR013C-A	150 nt		-3.25	□□□□□ -2.93
DDR2	P89113	YEL020C-B	YEL020C-B	198 nt		-3.26	□□□□□ -2.93
DDR2	P89113	YHR007C-A	YHR007C-A	216 nt		-3.26	□□□□□ -2.93
DDR2	P89113	snR50	snR50	90 nt		-3.26	□□□□□ -2.93
DDR2	P89113	YDR048C	YDR048C	315 nt		-3.27	□□□□□ -2.93
DDR2	P89113	Q0142	Q0142	177 nt		-3.27	□□□□□ -2.93
DDR2	P89113	YOR309C	YOR309C	381 nt		-3.27	□□□□□ -2.93
DDR2	P89113	PRM3	YPL192C	402 nt		-3.29	□□□□□ -2.94
DDR2	P89113	MRPL32	YCR003W	552 nt		-3.3	□□□□□ -2.94
DDR2	P89113	YPR039W	YPR039W	336 nt		-3.3	□□□□□ -2.94
DDR2	P89113	BUD26	YDR241W	288 nt		-3.31	□□□□□ -2.94
DDR2	P89113	IRC13	YOR235W	315 nt		-3.32	□□□□□ -2.94
DDR2	P89113	YNL171C	YNL171C	369 nt		-3.33	□□□□□ -2.94
DDR2	P89113	YPR002C-A	YPR002C-A	198 nt		-3.33	□□□□□ -2.94
DDR2	P89113	POP6	YGR030C	477 nt		-3.34	□□□□□ -2.94
DDR2	P89113	YDR544C	YDR544C	429 nt		-3.35	□□□□□ -2.95
DDR2	P89113	YHR050W-A	YHR050W-A	171 nt		-3.35	□□□□□ -2.95
DDR2	P89113	YMR172C-A	YMR172C-A	384 nt		-3.4	□□□□□ -2.95
DDR2	P89113	TOM22	YNL131W	459 nt		-3.4	□□□□□ -2.95
DDR2	P89113	ATP19	YOL077W-A	207 nt		-3.42	□□□□□ -2.96
DDR2	P89113	YGR270C-A	YGR270C-A	219 nt		-3.44	□□□□□ -2.96
DDR2	P89113	YDR426C	YDR426C	378 nt		-3.47	□□□□□ -2.96
DDR2	P89113	snR67	snR67	82 nt		-3.48	□□□□□ -2.97
DDR2	P89113	YKL063C	YKL063C	504 nt		-3.48	□□□□□ -2.97
DDR2	P89113	snR69	snR69	101 nt		-3.49	□□□□□ -2.97
DDR2	P89113	GPI15	YNL038W	690 nt		-3.49	□□□□□ -2.97
DDR2	P89113	YOL083C-A	YOL083C-A	141 nt		-3.55	□□□□□ -2.98
DDR2	P89113	YML099W-A	YML099W-A	330 nt		-3.56	□□□□□ -2.98
DDR2	P89113	YDR524W-C	YDR524W-C	90 nt		-3.59	□□□□□ -2.98
DDR2	P89113	YOR008C-A	YOR008C-A	225 nt		-3.6	□□□□□ -2.99
DDR2	P89113	YGR069W	YGR069W	336 nt		-3.62	□□□□□ -2.99
DDR2	P89113	YLR269C	YLR269C	351 nt		-3.62	□□□□□ -2.99
DDR2	P89113	YDL011C	YDL011C	324 nt		-3.64	□□□□□ -2.99
DDR2	P89113	YOR314W-A	YOR314W-A	111 nt		-3.64	□□□□□ -2.99
DDR2	P89113	YLR163W-A	YLR163W-A	114 nt		-3.69	□□□□□ -3
DDR2	P89113	YDR102C	YDR102C	333 nt		-3.72	□□□□□ -3
DDR2	P89113	YLR217W	YLR217W	324 nt		-3.72	□□□□□ -3
DDR2	P89113	PCC1	YKR095W-A	267 nt		-3.75	□□□□□ -3.01
DDR2	P89113	YBR182C-A	YBR182C-A	195 nt		-3.79	□□□□□ -3.02
DDR2	P89113	YGL149W	YGL149W	306 nt		-3.82	□□□□□ -3.02
DDR2	P89113	snR9	snR9	187 nt		-3.85	□□□□□ -3.03
DDR2	P89113	YLL019W-A	YLL019W-A	93 nt		-3.85	□□□□□ -3.03
DDR2	P89113	HMRA1	YCR097W	381 nt		-3.86	□□□□□ -3.03
DDR2	P89113	YLR342W-A	YLR342W-A	174 nt		-3.88	□□□□□ -3.03
DDR2	P89113	YBL071C	YBL071C	309 nt		-3.89	□□□□□ -3.03
DDR2	P89113	snR57	snR57	88 nt		-3.9	□□□□□ -3.03
DDR2	P89113	TSC3	YBR058C-A	243 nt		-3.9	□□□□□ -3.03
DDR2	P89113	YER137W-A	YER137W-A	306 nt		-3.93	□□□□□ -3.04
DDR2	P89113	YJL197C-A	YJL197C-A	282 nt		-3.93	□□□□□ -3.04
DDR2	P89113	YOR376W-A	YOR376W-A	156 nt		-3.94	□□□□□ -3.04
DDR2	P89113	YGR174W-A	YGR174W-A	87 nt		-3.98	□□□□□ -3.05
DDR2	P89113	YJR162C	YJR162C	351 nt		-4.01	□□□□□ -3.05
DDR2	P89113	YNL337W	YNL337W	255 nt		-4.01	□□□□□ -3.05
DDR2	P89113	YDL158C	YDL158C	309 nt		-4.02	□□□□□ -3.05
DDR2	P89113	YLR286W-A	YLR286W-A	135 nt		-4.03	□□□□□ -3.05
DDR2	P89113	YER097W	YER097W	330 nt		-4.12	□□□□□ -3.07
DDR2	P89113	tD(GUC)Q	tD(GUC)Q	75 nt		-4.13	□□□□□ -3.07
DDR2	P89113	ATG16	YMR159C	453 nt		-4.14	□□□□□ -3.07
DDR2	P89113	YER175W-A	YER175W-A	165 nt		-4.16	□□□□□ -3.08
DDR2	P89113	YDL016C	YDL016C	303 nt		-4.17	□□□□□ -3.08
DDR2	P89113	YIL115W-A	YIL115W-A	372 nt		-4.18	□□□□□ -3.08
DDR2	P89113	AI5_BETA	Q0075	1065 nt		-4.19	□□□□□ -3.08
DDR2	P89113	YAR047C	YAR047C	321 nt		-4.21	□□□□□ -3.08
DDR2	P89113	YDL159C-B	YDL159C-B	177 nt		-4.22	□□□□□ -3.08
DDR2	P89113	YOR316C-A	YOR316C-A	210 nt		-4.25	□□□□□ -3.09
DDR2	P89113	YOR072W-B	YOR072W-B	162 nt		-4.26	□□□□□ -3.09
DDR2	P89113	YER181C	YER181C	324 nt		-4.28	□□□□□ -3.09
DDR2	P89113	YGR146C-A	YGR146C-A	162 nt		-4.28	□□□□□ -3.09
DDR2	P89113	YIL029C	YIL029C	429 nt		-4.29	□□□□□ -3.1
DDR2	P89113	YPR197C	YPR197C	564 nt		-4.3	□□□□□ -3.1
DDR2	P89113	YBR178W	YBR178W	375 nt		-4.31	□□□□□ -3.1
DDR2	P89113	YBR196C-A	YBR196C-A	150 nt		-4.31	□□□□□ -3.1
DDR2	P89113	YFL019C	YFL019C	354 nt		-4.34	□□□□□ -3.1
DDR2	P89113	tM(CAU)Q2	tM(CAU)Q2	78 nt		-4.37	□□□□□ -3.11
DDR2	P89113	YLR406C-A	YLR406C-A	150 nt		-4.37	□□□□□ -3.11
DDR2	P89113	YOL155W-A	YOL155W-A	135 nt		-4.37	□□□□□ -3.11
DDR2	P89113	snR6	snR6	112 nt		-4.39	□□□□□ -3.11
DDR2	P89113	CSN9	YDR179C	489 nt		-4.39	□□□□□ -3.11
DDR2	P89113	YFL032W	YFL032W	321 nt		-4.41	□□□□□ -3.12
DDR2	P89113	YDR524C-A	YDR524C-A	120 nt		-4.42	□□□□□ -3.12
DDR2	P89113	snR55	snR55	98 nt		-4.43	□□□□□ -3.12
DDR2	P89113	YPR012W	YPR012W	255 nt		-4.46	□□□□□ -3.12
DDR2	P89113	STE18	YJR086W	333 nt		-4.47	□□□□□ -3.13
DDR2	P89113	YJR157W	YJR157W	363 nt		-4.48	□□□□□ -3.13

Retrieved 100 of 7,029 protein–RNA pairs in 133.1 ms