Protein–RNA interactions for Protein: P53281

LSB1, LAS seventeen-binding protein 1, yeastyeast

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSB1P53281 PRP39YML046W 1890 nt0.02□□□□□ -2.41
LSB1P53281 YDR157WYDR157W 402 nt0.02□□□□□ -2.41
LSB1P53281 snR45snR45 172 nt0.02□□□□□ -2.41
LSB1P53281 YJL197C-AYJL197C-A 282 nt0.01□□□□□ -2.41
LSB1P53281 SNU13YEL026W 381 nt-0.01□□□□□ -2.41
LSB1P53281 YDR366CYDR366C 399 nt-0.02□□□□□ -2.41
LSB1P53281 YFL063WYFL063W 456 nt-0.02□□□□□ -2.41
LSB1P53281 YPR016W-AYPR016W-A 261 nt-0.02□□□□□ -2.41
LSB1P53281 YKU70YMR284W 1809 nt-0.02□□□□□ -2.41
LSB1P53281 YIL032CYIL032C 357 nt-0.03□□□□□ -2.41
LSB1P53281 YLL019W-AYLL019W-A 93 nt-0.03□□□□□ -2.41
LSB1P53281 HTL1YCR020W-B 237 nt-0.05□□□□□ -2.42
LSB1P53281 Q0144Q0144 330 nt-0.05□□□□□ -2.42
LSB1P53281 YLR041WYLR041W 321 nt-0.05□□□□□ -2.42
LSB1P53281 YLR232WYLR232W 348 nt-0.05□□□□□ -2.42
LSB1P53281 VAR1Q0140 1197 nt-0.06□□□□□ -2.42
LSB1P53281 YOR072W-BYOR072W-B 162 nt-0.06□□□□□ -2.42
LSB1P53281 YBR072C-AYBR072C-A 162 nt-0.08□□□□□ -2.42
LSB1P53281 YEL073CYEL073C 324 nt-0.09□□□□□ -2.42
LSB1P53281 YMR193C-AYMR193C-A 387 nt-0.09□□□□□ -2.42
LSB1P53281 YNL028WYNL028W 318 nt-0.1□□□□□ -2.43
LSB1P53281 YPL038W-AYPL038W-A 192 nt-0.1□□□□□ -2.43
LSB1P53281 YGL149WYGL149W 306 nt-0.11□□□□□ -2.43
LSB1P53281 YAF9YNL107W 681 nt-0.11□□□□□ -2.43
LSB1P53281 YDR102CYDR102C 333 nt-0.13□□□□□ -2.43
LSB1P53281 YDR210WYDR210W 228 nt-0.13□□□□□ -2.43
LSB1P53281 YGR069WYGR069W 336 nt-0.14□□□□□ -2.43
LSB1P53281 YER053C-AYER053C-A 114 nt-0.15□□□□□ -2.43
LSB1P53281 CSE1YGL238W 2883 nt-0.15□□□□□ -2.43
LSB1P53281 YMR158W-BYMR158W-B 321 nt-0.16□□□□□ -2.44
LSB1P53281 snR128snR128 126 nt-0.16□□□□□ -2.44
LSB1P53281 YPR170W-AYPR170W-A 186 nt-0.16□□□□□ -2.44
LSB1P53281 snR36snR36 182 nt-0.16□□□□□ -2.44
LSB1P53281 SOV1YMR066W 2697 nt-0.18□□□□□ -2.44
LSB1P53281 YDR183C-AYDR183C-A 258 nt-0.19□□□□□ -2.44
LSB1P53281 YPR197CYPR197C 564 nt-0.19□□□□□ -2.44
LSB1P53281 GLG1YKR058W 1851 nt-0.19□□□□□ -2.44
LSB1P53281 snR8snR8 190 nt-0.22□□□□□ -2.44
LSB1P53281 YDR118W-AYDR118W-A 117 nt-0.22□□□□□ -2.44
LSB1P53281 YIL002W-AYIL002W-A 210 nt-0.23□□□□□ -2.45
LSB1P53281 YBR099CYBR099C 384 nt-0.23□□□□□ -2.45
LSB1P53281 YCR038W-AYCR038W-A 126 nt-0.25□□□□□ -2.45
LSB1P53281 YLR120W-AYLR120W-A 102 nt-0.25□□□□□ -2.45
LSB1P53281 YOR015WYOR015W 360 nt-0.25□□□□□ -2.45
LSB1P53281 HMRA1YCR097W 381 nt-0.26□□□□□ -2.45
LSB1P53281 TFB5YDR079C-A 219 nt-0.26□□□□□ -2.45
LSB1P53281 SDH6YDR379C-A 240 nt-0.26□□□□□ -2.45
LSB1P53281 SBH2YER019C-A 267 nt-0.27□□□□□ -2.45
LSB1P53281 APQ12YIL040W 417 nt-0.27□□□□□ -2.45
LSB1P53281 RAD61YDR014W 1944 nt-0.28□□□□□ -2.45
LSB1P53281 ATP6Q0085 780 nt-0.28□□□□□ -2.45
LSB1P53281 YFL032WYFL032W 321 nt-0.29□□□□□ -2.46
LSB1P53281 YPR012WYPR012W 255 nt-0.29□□□□□ -2.46
LSB1P53281 YDL240C-AYDL240C-A 138 nt-0.3□□□□□ -2.46
LSB1P53281 YFL019CYFL019C 354 nt-0.3□□□□□ -2.46
LSB1P53281 EST1YLR233C 2100 nt-0.31□□□□□ -2.46
LSB1P53281 snR74snR74 88 nt-0.31□□□□□ -2.46
LSB1P53281 YGL052WYGL052W 306 nt-0.32□□□□□ -2.46
LSB1P53281 RPL39YJL189W 156 nt-0.32□□□□□ -2.46
LSB1P53281 SEC10YLR166C 2616 nt-0.33□□□□□ -2.46
LSB1P53281 YDR544CYDR544C 429 nt-0.34□□□□□ -2.46
LSB1P53281 TAH1YCR060W 336 nt-0.35□□□□□ -2.47
LSB1P53281 YJL113WYJL113W 4647 nt-0.35□□□□□ -2.47
LSB1P53281 YGR164WYGR164W 336 nt-0.36□□□□□ -2.47
LSB1P53281 YMR172C-AYMR172C-A 384 nt-0.36□□□□□ -2.47
LSB1P53281 URB1YKL014C 5295 nt-0.36□□□□□ -2.47
LSB1P53281 YDR413CYDR413C 576 nt-0.37□□□□□ -2.47
LSB1P53281 YOR008C-AYOR008C-A 225 nt-0.37□□□□□ -2.47
LSB1P53281 snR46snR46 197 nt-0.38□□□□□ -2.47
LSB1P53281 YKL118WYKL118W 312 nt-0.39□□□□□ -2.47
LSB1P53281 COG6YNL041C 2520 nt-0.39□□□□□ -2.47
LSB1P53281 YIR030W-AYIR030W-A 384 nt-0.41□□□□□ -2.48
LSB1P53281 YER097WYER097W 330 nt-0.43□□□□□ -2.48
LSB1P53281 YNL067W-BYNL067W-B 141 nt-0.44□□□□□ -2.48
LSB1P53281 GIM4YEL003W 336 nt-0.45□□□□□ -2.48
LSB1P53281 YBL039C-AYBL039C-A 84 nt-0.47□□□□□ -2.48
LSB1P53281 YBR182C-AYBR182C-A 195 nt-0.48□□□□□ -2.49
LSB1P53281 YGL041CYGL041C 204 nt-0.5□□□□□ -2.49
LSB1P53281 RPM2YML091C 3609 nt-0.51□□□□□ -2.49
LSB1P53281 tT(UGU)G1tT(UGU)G1 72 nt-0.51□□□□□ -2.49
LSB1P53281 tT(UGU)G2tT(UGU)G2 72 nt-0.51□□□□□ -2.49
LSB1P53281 tT(UGU)PtT(UGU)P 72 nt-0.51□□□□□ -2.49
LSB1P53281 YOR314W-AYOR314W-A 111 nt-0.51□□□□□ -2.49
LSB1P53281 snR33snR33 183 nt-0.51□□□□□ -2.49
LSB1P53281 YIL071W-AYIL071W-A 477 nt-0.53□□□□□ -2.49
LSB1P53281 YDL007C-AYDL007C-A 258 nt-0.54□□□□□ -2.5
LSB1P53281 YML099W-AYML099W-A 330 nt-0.54□□□□□ -2.5
LSB1P53281 YNL277W-AYNL277W-A 189 nt-0.54□□□□□ -2.5
LSB1P53281 YGL182CYGL182C 324 nt-0.55□□□□□ -2.5
LSB1P53281 YJL077W-AYJL077W-A 87 nt-0.59□□□□□ -2.5
LSB1P53281 snR55snR55 98 nt-0.61□□□□□ -2.51
LSB1P53281 tA(UGC)QtA(UGC)Q 76 nt-0.61□□□□□ -2.51
LSB1P53281 tF(GAA)QtF(GAA)Q 75 nt-0.61□□□□□ -2.51
LSB1P53281 YER181CYER181C 324 nt-0.61□□□□□ -2.51
LSB1P53281 PAU9YBL108C-A 129 nt-0.61□□□□□ -2.51
LSB1P53281 snR161snR161 161 nt-0.62□□□□□ -2.51
LSB1P53281 YPR010C-AYPR010C-A 219 nt-0.63□□□□□ -2.51
LSB1P53281 YHR175W-AYHR175W-A 150 nt-0.64□□□□□ -2.51
LSB1P53281 YHL009W-BYHL009W-B 5409 nt-0.66□□□□□ -2.51
LSB1P53281 tM(CAU)Q2tM(CAU)Q2 78 nt-0.66□□□□□ -2.52
Retrieved 100 of 7,029 protein–RNA pairs in 44.3 ms