Protein–RNA interactions for Protein: P53146

USE1, Protein transport protein USE1, yeastyeast

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
USE1P53146 SNU13YEL026W 381 nt-0.12□□□□□ -2.43
USE1P53146 YLR232WYLR232W 348 nt-0.13□□□□□ -2.43
USE1P53146 YDR366CYDR366C 399 nt-0.14□□□□□ -2.43
USE1P53146 YJL197C-AYJL197C-A 282 nt-0.15□□□□□ -2.43
USE1P53146 snR45snR45 172 nt-0.15□□□□□ -2.43
USE1P53146 YLL019W-AYLL019W-A 93 nt-0.17□□□□□ -2.44
USE1P53146 YLR154W-FYLR154W-F 141 nt-0.17□□□□□ -2.44
USE1P53146 snR60snR60 104 nt-0.18□□□□□ -2.44
USE1P53146 YGR069WYGR069W 336 nt-0.18□□□□□ -2.44
USE1P53146 YPR016W-AYPR016W-A 261 nt-0.18□□□□□ -2.44
USE1P53146 YBR072C-AYBR072C-A 162 nt-0.2□□□□□ -2.44
USE1P53146 THO2YNL139C 4794 nt-0.21□□□□□ -2.44
USE1P53146 HTL1YCR020W-B 237 nt-0.22□□□□□ -2.44
USE1P53146 YIL032CYIL032C 357 nt-0.24□□□□□ -2.45
USE1P53146 YLR222C-AYLR222C-A 231 nt-0.24□□□□□ -2.45
USE1P53146 YMR158W-BYMR158W-B 321 nt-0.24□□□□□ -2.45
USE1P53146 YMR193C-AYMR193C-A 387 nt-0.24□□□□□ -2.45
USE1P53146 snR8snR8 190 nt-0.25□□□□□ -2.45
USE1P53146 YER053C-AYER053C-A 114 nt-0.25□□□□□ -2.45
USE1P53146 snR128snR128 126 nt-0.25□□□□□ -2.45
USE1P53146 YOR072W-BYOR072W-B 162 nt-0.26□□□□□ -2.45
USE1P53146 YBR099CYBR099C 384 nt-0.28□□□□□ -2.45
USE1P53146 YDR157WYDR157W 402 nt-0.29□□□□□ -2.46
USE1P53146 YNL028WYNL028W 318 nt-0.29□□□□□ -2.46
USE1P53146 GLG1YKR058W 1851 nt-0.29□□□□□ -2.46
USE1P53146 YDR102CYDR102C 333 nt-0.3□□□□□ -2.46
USE1P53146 YDR210WYDR210W 228 nt-0.33□□□□□ -2.46
USE1P53146 CSE1YGL238W 2883 nt-0.33□□□□□ -2.46
USE1P53146 YIL002W-AYIL002W-A 210 nt-0.34□□□□□ -2.46
USE1P53146 YAF9YNL107W 681 nt-0.34□□□□□ -2.46
USE1P53146 HMRA1YCR097W 381 nt-0.35□□□□□ -2.47
USE1P53146 YDR183C-AYDR183C-A 258 nt-0.35□□□□□ -2.47
USE1P53146 SDH6YDR379C-A 240 nt-0.35□□□□□ -2.47
USE1P53146 YOR015WYOR015W 360 nt-0.35□□□□□ -2.47
USE1P53146 YGL149WYGL149W 306 nt-0.37□□□□□ -2.47
USE1P53146 EST1YLR233C 2100 nt-0.37□□□□□ -2.47
USE1P53146 YLR120W-AYLR120W-A 102 nt-0.38□□□□□ -2.47
USE1P53146 RAD61YDR014W 1944 nt-0.38□□□□□ -2.47
USE1P53146 YCR038W-AYCR038W-A 126 nt-0.39□□□□□ -2.47
USE1P53146 VAR1Q0140 1197 nt-0.39□□□□□ -2.47
USE1P53146 APQ12YIL040W 417 nt-0.39□□□□□ -2.47
USE1P53146 SBH2YER019C-A 267 nt-0.4□□□□□ -2.47
USE1P53146 UTP8YGR128C 2142 nt-0.41□□□□□ -2.48
USE1P53146 TFB5YDR079C-A 219 nt-0.42□□□□□ -2.48
USE1P53146 PRP39YML046W 1890 nt-0.43□□□□□ -2.48
USE1P53146 YDR118W-AYDR118W-A 117 nt-0.43□□□□□ -2.48
USE1P53146 YPL038W-AYPL038W-A 192 nt-0.43□□□□□ -2.48
USE1P53146 snR36snR36 182 nt-0.43□□□□□ -2.48
USE1P53146 snR74snR74 88 nt-0.44□□□□□ -2.48
USE1P53146 ATP6Q0085 780 nt-0.44□□□□□ -2.48
USE1P53146 Q0144Q0144 330 nt-0.46□□□□□ -2.48
USE1P53146 TAH1YCR060W 336 nt-0.47□□□□□ -2.48
USE1P53146 YMR172C-AYMR172C-A 384 nt-0.47□□□□□ -2.48
USE1P53146 YPR197CYPR197C 564 nt-0.48□□□□□ -2.49
USE1P53146 RPM2YML091C 3609 nt-0.49□□□□□ -2.49
USE1P53146 YDR544CYDR544C 429 nt-0.49□□□□□ -2.49
USE1P53146 COG6YNL041C 2520 nt-0.49□□□□□ -2.49
USE1P53146 YGL052WYGL052W 306 nt-0.5□□□□□ -2.49
USE1P53146 YGR164WYGR164W 336 nt-0.5□□□□□ -2.49
USE1P53146 YFL032WYFL032W 321 nt-0.53□□□□□ -2.49
USE1P53146 YPR170W-AYPR170W-A 186 nt-0.53□□□□□ -2.49
USE1P53146 YPL060C-AYPL060C-A 3315 nt-0.53□□□□□ -2.49
USE1P53146 SEC10YLR166C 2616 nt-0.54□□□□□ -2.5
USE1P53146 YPR012WYPR012W 255 nt-0.55□□□□□ -2.5
USE1P53146 YDL240C-AYDL240C-A 138 nt-0.56□□□□□ -2.5
USE1P53146 YIR030W-AYIR030W-A 384 nt-0.57□□□□□ -2.5
USE1P53146 YBL039C-AYBL039C-A 84 nt-0.57□□□□□ -2.5
USE1P53146 RPL39YJL189W 156 nt-0.58□□□□□ -2.5
USE1P53146 YOR008C-AYOR008C-A 225 nt-0.58□□□□□ -2.5
USE1P53146 YOR314W-AYOR314W-A 111 nt-0.59□□□□□ -2.5
USE1P53146 snR46snR46 197 nt-0.6□□□□□ -2.51
USE1P53146 YFL019CYFL019C 354 nt-0.62□□□□□ -2.51
USE1P53146 URB1YKL014C 5295 nt-0.63□□□□□ -2.51
USE1P53146 YDR413CYDR413C 576 nt-0.63□□□□□ -2.51
USE1P53146 YKL118WYKL118W 312 nt-0.63□□□□□ -2.51
USE1P53146 YER097WYER097W 330 nt-0.64□□□□□ -2.51
USE1P53146 YML099W-AYML099W-A 330 nt-0.65□□□□□ -2.51
USE1P53146 YGL182CYGL182C 324 nt-0.67□□□□□ -2.52
USE1P53146 YBR182C-AYBR182C-A 195 nt-0.67□□□□□ -2.52
USE1P53146 YIL071W-AYIL071W-A 477 nt-0.68□□□□□ -2.52
USE1P53146 YGL041CYGL041C 204 nt-0.69□□□□□ -2.52
USE1P53146 YML100W-AYML100W-A 174 nt-0.69□□□□□ -2.52
USE1P53146 YJL113WYJL113W 4647 nt-0.7□□□□□ -2.52
USE1P53146 YDL007C-AYDL007C-A 258 nt-0.71□□□□□ -2.52
USE1P53146 tF(GAA)QtF(GAA)Q 75 nt-0.72□□□□□ -2.52
USE1P53146 GIM4YEL003W 336 nt-0.72□□□□□ -2.52
USE1P53146 YJL077W-AYJL077W-A 87 nt-0.72□□□□□ -2.52
USE1P53146 YNL067W-BYNL067W-B 141 nt-0.73□□□□□ -2.53
USE1P53146 YNL277W-AYNL277W-A 189 nt-0.73□□□□□ -2.53
USE1P53146 tA(UGC)QtA(UGC)Q 76 nt-0.75□□□□□ -2.53
USE1P53146 YPR010C-AYPR010C-A 219 nt-0.75□□□□□ -2.53
USE1P53146 YER181CYER181C 324 nt-0.77□□□□□ -2.53
USE1P53146 YOR381W-AYOR381W-A 168 nt-0.82□□□□□ -2.54
USE1P53146 YEL014CYEL014C 306 nt-0.83□□□□□ -2.54
USE1P53146 tQ(UUG)QtQ(UUG)Q 76 nt-0.83□□□□□ -2.54
USE1P53146 YJL182CYJL182C 318 nt-0.83□□□□□ -2.54
USE1P53146 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
USE1P53146 YBR131C-AYBR131C-A 90 nt-0.84□□□□□ -2.54
USE1P53146 snR55snR55 98 nt-0.85□□□□□ -2.55
USE1P53146 PAU9YBL108C-A 129 nt-0.85□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms