Protein–RNA interactions for Protein: P53131

PRP43, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP43P53131 YMR247W-AYMR247W-A 144 nt1.99□□□□□ -2.09
PRP43P53131 HIR3YJR140C 4947 nt1.99□□□□□ -2.09
PRP43P53131 FYV10YIL097W 1551 nt1.98□□□□□ -2.09
PRP43P53131 SYH1YPL105C 2550 nt1.98□□□□□ -2.09
PRP43P53131 TBS1YBR150C 3285 nt1.97□□□□□ -2.09
PRP43P53131 PET309YLR067C 2898 nt1.97□□□□□ -2.09
PRP43P53131 YHR214C-BYHR214C-B 5382 nt1.96□□□□□ -2.1
PRP43P53131 YLR286W-AYLR286W-A 135 nt1.96□□□□□ -2.1
PRP43P53131 ASE1YOR058C 2658 nt1.96□□□□□ -2.1
PRP43P53131 YGR130CYGR130C 2451 nt1.95□□□□□ -2.1
PRP43P53131 IML1YJR138W 4755 nt1.95□□□□□ -2.1
PRP43P53131 YGR146C-AYGR146C-A 162 nt1.95□□□□□ -2.1
PRP43P53131 YKL100W-AYKL100W-A 90 nt1.95□□□□□ -2.1
PRP43P53131 YLR041WYLR041W 321 nt1.95□□□□□ -2.1
PRP43P53131 YPR117WYPR117W 7470 nt1.94□□□□□ -2.1
PRP43P53131 MSH6YDR097C 3729 nt1.94□□□□□ -2.1
PRP43P53131 SEC21YNL287W 2808 nt1.93□□□□□ -2.1
PRP43P53131 RSM22YKL155C 1887 nt1.92□□□□□ -2.1
PRP43P53131 MYO2YOR326W 4725 nt1.92□□□□□ -2.1
PRP43P53131 GCN2YDR283C 4980 nt1.92□□□□□ -2.1
PRP43P53131 snR64snR64 101 nt1.92□□□□□ -2.1
PRP43P53131 snR47snR47 99 nt1.92□□□□□ -2.1
PRP43P53131 YMR045CYMR045C 5268 nt1.92□□□□□ -2.1
PRP43P53131 SXM1YDR395W 2835 nt1.91□□□□□ -2.1
PRP43P53131 YBL100W-CYBL100W-C 120 nt1.91□□□□□ -2.1
PRP43P53131 YML002WYML002W 2214 nt1.91□□□□□ -2.1
PRP43P53131 NOP9YJL010C 2001 nt1.91□□□□□ -2.1
PRP43P53131 TRM732YMR259C 4263 nt1.91□□□□□ -2.1
PRP43P53131 CTR9YOL145C 3234 nt1.9□□□□□ -2.11
PRP43P53131 SPO24YPR036W-A 204 nt1.89□□□□□ -2.11
PRP43P53131 ALY2YJL084C 3141 nt1.88□□□□□ -2.11
PRP43P53131 UTP21YLR409C 2820 nt1.87□□□□□ -2.11
PRP43P53131 YDL073WYDL073W 2955 nt1.86□□□□□ -2.11
PRP43P53131 AZF1YOR113W 2745 nt1.86□□□□□ -2.11
PRP43P53131 YBR196C-AYBR196C-A 150 nt1.86□□□□□ -2.11
PRP43P53131 KCS1YDR017C 3153 nt1.84□□□□□ -2.11
PRP43P53131 NUT1YGL151W 3399 nt1.84□□□□□ -2.11
PRP43P53131 YOR093CYOR093C 4947 nt1.84□□□□□ -2.12
PRP43P53131 UBP3YER151C 2739 nt1.83□□□□□ -2.12
PRP43P53131 RPL26BYGR034W 384 nt1.83□□□□□ -2.12
PRP43P53131 YBR109W-AYBR109W-A 225 nt1.83□□□□□ -2.12
PRP43P53131 IRE1YHR079C 3348 nt1.83□□□□□ -2.12
PRP43P53131 WAR1YML076C 2835 nt1.82□□□□□ -2.12
PRP43P53131 SEC10YLR166C 2616 nt1.81□□□□□ -2.12
PRP43P53131 snR14snR14 160 nt1.81□□□□□ -2.12
PRP43P53131 MMS4YBR098W 2076 nt1.81□□□□□ -2.12
PRP43P53131 snR50snR50 90 nt1.8□□□□□ -2.12
PRP43P53131 PAN2YGL094C 3348 nt1.8□□□□□ -2.12
PRP43P53131 NNF2YGR089W 2811 nt1.78□□□□□ -2.12
PRP43P53131 CLU1YMR012W 3834 nt1.78□□□□□ -2.12
PRP43P53131 snR190snR190 190 nt1.78□□□□□ -2.12
PRP43P53131 RAD50YNL250W 3939 nt1.77□□□□□ -2.13
PRP43P53131 YER078W-AYER078W-A 165 nt1.77□□□□□ -2.13
PRP43P53131 SPC110YDR356W 2835 nt1.76□□□□□ -2.13
PRP43P53131 RAD9YDR217C 3930 nt1.76□□□□□ -2.13
PRP43P53131 YKL225WYKL225W 348 nt1.75□□□□□ -2.13
PRP43P53131 YLR149C-AYLR149C-A 87 nt1.75□□□□□ -2.13
PRP43P53131 SKI3YPR189W 4299 nt1.73□□□□□ -2.13
PRP43P53131 YBR200W-AYBR200W-A 165 nt1.73□□□□□ -2.13
PRP43P53131 RPM2YML091C 3609 nt1.72□□□□□ -2.13
PRP43P53131 SMC1YFL008W 3678 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)E1tH(GUG)E1 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)E2tH(GUG)E2 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)G1tH(GUG)G1 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)G2tH(GUG)G2 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)HtH(GUG)H 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)KtH(GUG)K 72 nt1.71□□□□□ -2.14
PRP43P53131 tH(GUG)MtH(GUG)M 72 nt1.71□□□□□ -2.14
PRP43P53131 MYO1YHR023W 5787 nt1.71□□□□□ -2.14
PRP43P53131 YDL159W-AYDL159W-A 132 nt1.7□□□□□ -2.14
PRP43P53131 VPS15YBR097W 4365 nt1.7□□□□□ -2.14
PRP43P53131 KAP122YGL016W 3246 nt1.69□□□□□ -2.14
PRP43P53131 SMC4YLR086W 4257 nt1.69□□□□□ -2.14
PRP43P53131 MON2YNL297C 4911 nt1.69□□□□□ -2.14
PRP43P53131 EMC5YIL027C 426 nt1.69□□□□□ -2.14
PRP43P53131 MSN5YDR335W 3675 nt1.68□□□□□ -2.14
PRP43P53131 GEA2YEL022W 4380 nt1.68□□□□□ -2.14
PRP43P53131 BST1YFL025C 3090 nt1.68□□□□□ -2.14
PRP43P53131 STO1YMR125W 2586 nt1.67□□□□□ -2.14
PRP43P53131 FIG2YCR089W 4830 nt1.65□□□□□ -2.14
PRP43P53131 tD(GUC)QtD(GUC)Q 75 nt1.65□□□□□ -2.15
PRP43P53131 tN(GUU)QtN(GUU)Q 71 nt1.65□□□□□ -2.15
PRP43P53131 YKL096C-BYKL096C-B 150 nt1.65□□□□□ -2.15
PRP43P53131 YCS4YLR272C 3531 nt1.64□□□□□ -2.15
PRP43P53131 snR75snR75 89 nt1.64□□□□□ -2.15
PRP43P53131 tQ(UUG)E2tQ(UUG)E2 72 nt1.63□□□□□ -2.15
PRP43P53131 snR38snR38 95 nt1.63□□□□□ -2.15
PRP43P53131 YLR299C-AYLR299C-A 93 nt1.62□□□□□ -2.15
PRP43P53131 PMD1YER132C 5262 nt1.61□□□□□ -2.15
PRP43P53131 EST1YLR233C 2100 nt1.61□□□□□ -2.15
PRP43P53131 SIP4YJL089W 2490 nt1.61□□□□□ -2.15
PRP43P53131 AI1Q0050 2505 nt1.6□□□□□ -2.15
PRP43P53131 PET127YOR017W 2403 nt1.59□□□□□ -2.15
PRP43P53131 CDC25YLR310C 4770 nt1.59□□□□□ -2.15
PRP43P53131 BEM3YPL115C 3387 nt1.59□□□□□ -2.16
PRP43P53131 ROM2YLR371W 4071 nt1.58□□□□□ -2.16
PRP43P53131 FYV8YGR196C 2454 nt1.57□□□□□ -2.16
PRP43P53131 tV(UAC)BtV(UAC)B 74 nt1.57□□□□□ -2.16
PRP43P53131 tV(UAC)DtV(UAC)D 74 nt1.57□□□□□ -2.16
PRP43P53131 YPR160W-AYPR160W-A 81 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms