Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YMR315W-AYMR315W-A 108 nt-2.44□□□□□ -2.8
TRA1P38811 YML054C-AYML054C-A 159 nt-2.45□□□□□ -2.8
TRA1P38811 YDR366CYDR366C 399 nt-2.46□□□□□ -2.8
TRA1P38811 ZEO1YOL109W 342 nt-2.46□□□□□ -2.8
TRA1P38811 YCR001WYCR001W 315 nt-2.47□□□□□ -2.81
TRA1P38811 YMR193C-AYMR193C-A 387 nt-2.47□□□□□ -2.81
TRA1P38811 YER188C-AYER188C-A 300 nt-2.52□□□□□ -2.81
TRA1P38811 YLR334CYLR334C 381 nt-2.52□□□□□ -2.81
TRA1P38811 YNL303WYNL303W 348 nt-2.53□□□□□ -2.81
TRA1P38811 snR24snR24 89 nt-2.54□□□□□ -2.82
TRA1P38811 YJR087WYJR087W 351 nt-2.54□□□□□ -2.82
TRA1P38811 FYV7YLR068W 456 nt-2.55□□□□□ -2.82
TRA1P38811 YAF9YNL107W 681 nt-2.55□□□□□ -2.82
TRA1P38811 VPS63YLR261C 327 nt-2.55□□□□□ -2.82
TRA1P38811 YLR269CYLR269C 351 nt-2.57□□□□□ -2.82
TRA1P38811 GPI15YNL038W 690 nt-2.57□□□□□ -2.82
TRA1P38811 YEL020C-BYEL020C-B 198 nt-2.57□□□□□ -2.82
TRA1P38811 HMLALPHA2YCL067C 633 nt-2.59□□□□□ -2.82
TRA1P38811 MATALPHA2YCR039C 633 nt-2.59□□□□□ -2.82
TRA1P38811 HMRA2YCR096C 360 nt-2.59□□□□□ -2.82
TRA1P38811 YBR182C-AYBR182C-A 195 nt-2.59□□□□□ -2.82
TRA1P38811 YDR524W-CYDR524W-C 90 nt-2.59□□□□□ -2.82
TRA1P38811 YOR008C-AYOR008C-A 225 nt-2.6□□□□□ -2.83
TRA1P38811 YOL106WYOL106W 354 nt-2.61□□□□□ -2.83
TRA1P38811 YNL198CYNL198C 303 nt-2.62□□□□□ -2.83
TRA1P38811 YDR354C-AYDR354C-A 144 nt-2.63□□□□□ -2.83
TRA1P38811 YGL230CYGL230C 444 nt-2.63□□□□□ -2.83
TRA1P38811 LSM4YER112W 564 nt-2.65□□□□□ -2.83
TRA1P38811 YLR342W-AYLR342W-A 174 nt-2.67□□□□□ -2.84
TRA1P38811 snR50snR50 90 nt-2.67□□□□□ -2.84
TRA1P38811 YKL083WYKL083W 615 nt-2.68□□□□□ -2.84
TRA1P38811 ILM1YJR118C 612 nt-2.69□□□□□ -2.84
TRA1P38811 STE18YJR086W 333 nt-2.69□□□□□ -2.84
TRA1P38811 YNL162W-AYNL162W-A 219 nt-2.72□□□□□ -2.84
TRA1P38811 YHR007C-AYHR007C-A 216 nt-2.72□□□□□ -2.85
TRA1P38811 POP6YGR030C 477 nt-2.74□□□□□ -2.85
TRA1P38811 PRM3YPL192C 402 nt-2.76□□□□□ -2.85
TRA1P38811 snR59snR59 78 nt-2.77□□□□□ -2.85
TRA1P38811 YDR102CYDR102C 333 nt-2.77□□□□□ -2.85
TRA1P38811 YML099W-AYML099W-A 330 nt-2.77□□□□□ -2.85
TRA1P38811 YOR364WYOR364W 369 nt-2.78□□□□□ -2.85
TRA1P38811 YOL038C-AYOL038C-A 96 nt-2.78□□□□□ -2.85
TRA1P38811 YOR314W-AYOR314W-A 111 nt-2.78□□□□□ -2.85
TRA1P38811 YPR002C-AYPR002C-A 198 nt-2.78□□□□□ -2.85
TRA1P38811 TOM22YNL131W 459 nt-2.79□□□□□ -2.86
TRA1P38811 YLR217WYLR217W 324 nt-2.8□□□□□ -2.86
TRA1P38811 YDR426CYDR426C 378 nt-2.81□□□□□ -2.86
TRA1P38811 BIL1YOR304C-A 231 nt-2.82□□□□□ -2.86
TRA1P38811 snR69snR69 101 nt-2.82□□□□□ -2.86
TRA1P38811 snR67snR67 82 nt-2.83□□□□□ -2.86
TRA1P38811 YER175W-AYER175W-A 165 nt-2.83□□□□□ -2.86
TRA1P38811 YGR270C-AYGR270C-A 219 nt-2.89□□□□□ -2.87
TRA1P38811 YOR376W-AYOR376W-A 156 nt-2.91□□□□□ -2.87
TRA1P38811 PCC1YKR095W-A 267 nt-2.91□□□□□ -2.88
TRA1P38811 YDR544CYDR544C 429 nt-2.93□□□□□ -2.88
TRA1P38811 YJL197C-AYJL197C-A 282 nt-2.94□□□□□ -2.88
TRA1P38811 YPR197CYPR197C 564 nt-2.94□□□□□ -2.88
TRA1P38811 YPR039WYPR039W 336 nt-2.95□□□□□ -2.88
TRA1P38811 YDL011CYDL011C 324 nt-2.96□□□□□ -2.88
TRA1P38811 YGL149WYGL149W 306 nt-2.96□□□□□ -2.88
TRA1P38811 YDR220CYDR220C 294 nt-2.97□□□□□ -2.88
TRA1P38811 YMR013C-AYMR013C-A 150 nt-3.01□□□□□ -2.89
TRA1P38811 YDL158CYDL158C 309 nt-3.01□□□□□ -2.89
TRA1P38811 YNL171CYNL171C 369 nt-3.02□□□□□ -2.89
TRA1P38811 BNS1YGR230W 414 nt-3.03□□□□□ -2.89
TRA1P38811 snR55snR55 98 nt-3.03□□□□□ -2.89
TRA1P38811 YER181CYER181C 324 nt-3.03□□□□□ -2.89
TRA1P38811 YER137W-AYER137W-A 306 nt-3.04□□□□□ -2.9
TRA1P38811 YNL146C-AYNL146C-A 195 nt-3.04□□□□□ -2.9
TRA1P38811 BUD26YDR241W 288 nt-3.04□□□□□ -2.9
TRA1P38811 YGR069WYGR069W 336 nt-3.05□□□□□ -2.9
TRA1P38811 tD(GUC)QtD(GUC)Q 75 nt-3.08□□□□□ -2.9
TRA1P38811 YER097WYER097W 330 nt-3.09□□□□□ -2.9
TRA1P38811 YOR316C-AYOR316C-A 210 nt-3.1□□□□□ -2.91
TRA1P38811 YOL155W-AYOL155W-A 135 nt-3.11□□□□□ -2.91
TRA1P38811 snR9snR9 187 nt-3.12□□□□□ -2.91
TRA1P38811 YHR180C-BYHR180C-B 105 nt-3.17□□□□□ -2.92
TRA1P38811 snR57snR57 88 nt-3.17□□□□□ -2.92
TRA1P38811 YGR146C-AYGR146C-A 162 nt-3.18□□□□□ -2.92
TRA1P38811 snR6snR6 112 nt-3.21□□□□□ -2.92
TRA1P38811 YJL136W-AYJL136W-A 84 nt-3.21□□□□□ -2.92
TRA1P38811 YBR196C-AYBR196C-A 150 nt-3.23□□□□□ -2.93
TRA1P38811 YLR286W-AYLR286W-A 135 nt-3.23□□□□□ -2.93
TRA1P38811 YDL159C-BYDL159C-B 177 nt-3.24□□□□□ -2.93
TRA1P38811 HMRA1YCR097W 381 nt-3.25□□□□□ -2.93
TRA1P38811 ATG16YMR159C 453 nt-3.26□□□□□ -2.93
TRA1P38811 snR73snR73 106 nt-3.27□□□□□ -2.93
TRA1P38811 YHR050W-AYHR050W-A 171 nt-3.27□□□□□ -2.93
TRA1P38811 YOL013W-BYOL013W-B 291 nt-3.27□□□□□ -2.93
TRA1P38811 YJL150WYJL150W 303 nt-3.29□□□□□ -2.94
TRA1P38811 YLL019W-AYLL019W-A 93 nt-3.32□□□□□ -2.94
TRA1P38811 snR80snR80 171 nt-3.32□□□□□ -2.94
TRA1P38811 YOR072W-BYOR072W-B 162 nt-3.32□□□□□ -2.94
TRA1P38811 YGR174W-AYGR174W-A 87 nt-3.35□□□□□ -2.95
TRA1P38811 TSC3YBR058C-A 243 nt-3.35□□□□□ -2.95
TRA1P38811 YAR047CYAR047C 321 nt-3.36□□□□□ -2.95
TRA1P38811 YOR335W-AYOR335W-A 81 nt-3.4□□□□□ -2.95
TRA1P38811 YBL071CYBL071C 309 nt-3.42□□□□□ -2.96
TRA1P38811 snR87snR87 109 nt-3.42□□□□□ -2.96
TRA1P38811 YPR012WYPR012W 255 nt-3.43□□□□□ -2.96
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms