Protein–RNA interactions for Protein: P38630

RFC1, Replication factor C subunit 1, yeastyeast

Known RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC1P38630 MYO1YHR023W 5787 nt1.15□□□□□ -2.23
RFC1P38630 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
RFC1P38630 PMP1YCR024C-A 123 nt1.14□□□□□ -2.23
RFC1P38630 YGL123C-AYGL123C-A 231 nt1.14□□□□□ -2.23
RFC1P38630 YIL002W-AYIL002W-A 210 nt1.14□□□□□ -2.23
RFC1P38630 YEL073CYEL073C 324 nt1.13□□□□□ -2.23
RFC1P38630 YPL044CYPL044C 549 nt1.13□□□□□ -2.23
RFC1P38630 RPL26BYGR034W 384 nt1.12□□□□□ -2.23
RFC1P38630 YKL100W-AYKL100W-A 90 nt1.12□□□□□ -2.23
RFC1P38630 YFR012W-AYFR012W-A 87 nt1.11□□□□□ -2.23
RFC1P38630 COX5BYIL111W 456 nt1.11□□□□□ -2.23
RFC1P38630 YLR282CYLR282C 342 nt1.11□□□□□ -2.23
RFC1P38630 TRS65YGR166W 1683 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)BtF(GAA)B 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)FtF(GAA)F 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)GtF(GAA)G 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)H1tF(GAA)H1 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)H2tF(GAA)H2 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)MtF(GAA)M 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)P1tF(GAA)P1 73 nt1.1□□□□□ -2.23
RFC1P38630 tF(GAA)P2tF(GAA)P2 73 nt1.1□□□□□ -2.23
RFC1P38630 YER053C-AYER053C-A 114 nt1.1□□□□□ -2.23
RFC1P38630 YOR161W-AYOR161W-A 81 nt1.1□□□□□ -2.23
RFC1P38630 YSP1YHR155W 3687 nt1.1□□□□□ -2.23
RFC1P38630 DOP1YDR141C 5097 nt1.09□□□□□ -2.23
RFC1P38630 YLR294CYLR294C 330 nt1.09□□□□□ -2.23
RFC1P38630 snR190snR190 190 nt1.08□□□□□ -2.24
RFC1P38630 BFR2YDR299W 1605 nt1.07□□□□□ -2.24
RFC1P38630 YIL142C-AYIL142C-A 333 nt1.07□□□□□ -2.24
RFC1P38630 YNL338WYNL338W 159 nt1.07□□□□□ -2.24
RFC1P38630 YOR381W-AYOR381W-A 168 nt1.07□□□□□ -2.24
RFC1P38630 YML002WYML002W 2214 nt1.06□□□□□ -2.24
RFC1P38630 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
RFC1P38630 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
RFC1P38630 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
RFC1P38630 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
RFC1P38630 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
RFC1P38630 PRP42YDR235W 1635 nt1.06□□□□□ -2.24
RFC1P38630 YLR041WYLR041W 321 nt1.04□□□□□ -2.24
RFC1P38630 SEC8YPR055W 3198 nt1.03□□□□□ -2.24
RFC1P38630 PRP5YBR237W 2550 nt1.02□□□□□ -2.25
RFC1P38630 FYV10YIL097W 1551 nt1.01□□□□□ -2.25
RFC1P38630 UTP8YGR128C 2142 nt1□□□□□ -2.25
RFC1P38630 YLR399W-AYLR399W-A 105 nt0.98□□□□□ -2.25
RFC1P38630 YPR160W-AYPR160W-A 81 nt0.98□□□□□ -2.25
RFC1P38630 YGL182CYGL182C 324 nt0.95□□□□□ -2.26
RFC1P38630 YBL039C-AYBL039C-A 84 nt0.95□□□□□ -2.26
RFC1P38630 TAH1YCR060W 336 nt0.94□□□□□ -2.26
RFC1P38630 LTE1YAL024C 4308 nt0.94□□□□□ -2.26
RFC1P38630 YMR160WYMR160W 2451 nt0.93□□□□□ -2.26
RFC1P38630 SEC1YDR164C 2175 nt0.93□□□□□ -2.26
RFC1P38630 tN(GUU)QtN(GUU)Q 71 nt0.92□□□□□ -2.26
RFC1P38630 snR48snR48 113 nt0.92□□□□□ -2.26
RFC1P38630 IQG1YPL242C 4488 nt0.92□□□□□ -2.26
RFC1P38630 YHR131W-AYHR131W-A 246 nt0.91□□□□□ -2.26
RFC1P38630 YLR232WYLR232W 348 nt0.91□□□□□ -2.26
RFC1P38630 YOR170WYOR170W 306 nt0.91□□□□□ -2.26
RFC1P38630 YOL014WYOL014W 375 nt0.9□□□□□ -2.27
RFC1P38630 YOR102WYOR102W 351 nt0.9□□□□□ -2.27
RFC1P38630 RPM2YML091C 3609 nt0.89□□□□□ -2.27
RFC1P38630 YHL015W-AYHL015W-A 84 nt0.88□□□□□ -2.27
RFC1P38630 YBL053WYBL053W 375 nt0.88□□□□□ -2.27
RFC1P38630 YDL007C-AYDL007C-A 258 nt0.87□□□□□ -2.27
RFC1P38630 SNU13YEL026W 381 nt0.87□□□□□ -2.27
RFC1P38630 CHS6YJL099W 2241 nt0.87□□□□□ -2.27
RFC1P38630 BEM3YPL115C 3387 nt0.87□□□□□ -2.27
RFC1P38630 RKR1YMR247C 4689 nt0.86□□□□□ -2.27
RFC1P38630 OST4YDL232W 111 nt0.86□□□□□ -2.27
RFC1P38630 tT(AGU)BtT(AGU)B 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)CtT(AGU)C 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)DtT(AGU)D 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)HtT(AGU)H 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)I1tT(AGU)I1 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)I2tT(AGU)I2 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)JtT(AGU)J 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)N1tT(AGU)N1 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)N2tT(AGU)N2 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)O1tT(AGU)O1 73 nt0.84□□□□□ -2.27
RFC1P38630 tT(AGU)O2tT(AGU)O2 73 nt0.84□□□□□ -2.27
RFC1P38630 tL(UAA)QtL(UAA)Q 85 nt0.83□□□□□ -2.28
RFC1P38630 YOR314W-AYOR314W-A 111 nt0.83□□□□□ -2.28
RFC1P38630 YDR544CYDR544C 429 nt0.81□□□□□ -2.28
RFC1P38630 BIR1YJR089W 2865 nt0.81□□□□□ -2.28
RFC1P38630 YOR329W-AYOR329W-A 210 nt0.8□□□□□ -2.28
RFC1P38630 YGR164WYGR164W 336 nt0.79□□□□□ -2.28
RFC1P38630 COG6YNL041C 2520 nt0.77□□□□□ -2.29
RFC1P38630 ULP2YIL031W 3105 nt0.77□□□□□ -2.29
RFC1P38630 YKL145W-AYKL145W-A 93 nt0.77□□□□□ -2.29
RFC1P38630 ATP8Q0080 147 nt0.76□□□□□ -2.29
RFC1P38630 YJL127W-AYJL127W-A 117 nt0.76□□□□□ -2.29
RFC1P38630 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
RFC1P38630 FMP27YLR454W 7887 nt0.74□□□□□ -2.29
RFC1P38630 Q0092Q0092 141 nt0.74□□□□□ -2.29
RFC1P38630 tM(CAU)Q2tM(CAU)Q2 78 nt0.74□□□□□ -2.29
RFC1P38630 snR39BsnR39B 96 nt0.74□□□□□ -2.29
RFC1P38630 SDH6YDR379C-A 240 nt0.73□□□□□ -2.29
RFC1P38630 YBR072C-AYBR072C-A 162 nt0.73□□□□□ -2.29
RFC1P38630 NNF2YGR089W 2811 nt0.73□□□□□ -2.29
RFC1P38630 GLG1YKR058W 1851 nt0.72□□□□□ -2.29
RFC1P38630 YNL067W-BYNL067W-B 141 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms