Protein–RNA interactions for Protein: P38221

CDS1, Phosphatidate cytidylyltransferase, yeastyeast

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDS1P38221 CHS6YJL099W 2241 nt1.24□□□□□ -2.21
CDS1P38221 TAH1YCR060W 336 nt1.23□□□□□ -2.21
CDS1P38221 RAD9YDR217C 3930 nt1.22□□□□□ -2.21
CDS1P38221 YLR232WYLR232W 348 nt1.21□□□□□ -2.22
CDS1P38221 YBL039C-AYBL039C-A 84 nt1.21□□□□□ -2.22
CDS1P38221 BEM3YPL115C 3387 nt1.21□□□□□ -2.22
CDS1P38221 YLR041WYLR041W 321 nt1.2□□□□□ -2.22
CDS1P38221 CAT8YMR280C 4302 nt1.2□□□□□ -2.22
CDS1P38221 YLR399W-AYLR399W-A 105 nt1.19□□□□□ -2.22
CDS1P38221 NUP192YJL039C 5052 nt1.19□□□□□ -2.22
CDS1P38221 ASE1YOR058C 2658 nt1.17□□□□□ -2.22
CDS1P38221 tL(UAA)QtL(UAA)Q 85 nt1.16□□□□□ -2.22
CDS1P38221 CDC31YOR257W 486 nt1.16□□□□□ -2.22
CDS1P38221 YPR160W-AYPR160W-A 81 nt1.15□□□□□ -2.23
CDS1P38221 YDL073WYDL073W 2955 nt1.14□□□□□ -2.23
CDS1P38221 tM(CAU)Q2tM(CAU)Q2 78 nt1.14□□□□□ -2.23
CDS1P38221 YHR131W-AYHR131W-A 246 nt1.14□□□□□ -2.23
CDS1P38221 YOR329W-AYOR329W-A 210 nt1.13□□□□□ -2.23
CDS1P38221 UBP3YER151C 2739 nt1.12□□□□□ -2.23
CDS1P38221 NST1YNL091W 3723 nt1.12□□□□□ -2.23
CDS1P38221 SPT7YBR081C 3999 nt1.12□□□□□ -2.23
CDS1P38221 YDR544CYDR544C 429 nt1.11□□□□□ -2.23
CDS1P38221 KAP120YPL125W 3099 nt1.1□□□□□ -2.23
CDS1P38221 QCR9YGR183C 201 nt1.1□□□□□ -2.23
CDS1P38221 YNL067W-BYNL067W-B 141 nt1.09□□□□□ -2.23
CDS1P38221 YSP1YHR155W 3687 nt1.08□□□□□ -2.24
CDS1P38221 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
CDS1P38221 YNL284C-BYNL284C-B 5268 nt1.07□□□□□ -2.24
CDS1P38221 tN(GUU)QtN(GUU)Q 71 nt1.07□□□□□ -2.24
CDS1P38221 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
CDS1P38221 YCL001W-BYCL001W-B 255 nt1.06□□□□□ -2.24
CDS1P38221 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
CDS1P38221 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
CDS1P38221 snR39BsnR39B 96 nt1.05□□□□□ -2.24
CDS1P38221 COG6YNL041C 2520 nt1.03□□□□□ -2.24
CDS1P38221 LAA1YJL207C 6045 nt1.03□□□□□ -2.25
CDS1P38221 YGR130CYGR130C 2451 nt1.02□□□□□ -2.25
CDS1P38221 YCR095W-AYCR095W-A 159 nt1.01□□□□□ -2.25
CDS1P38221 SOM1YEL059C-A 225 nt1.01□□□□□ -2.25
CDS1P38221 SCC2YDR180W 4482 nt1□□□□□ -2.25
CDS1P38221 OST4YDL232W 111 nt1□□□□□ -2.25
CDS1P38221 YJL127W-AYJL127W-A 117 nt1□□□□□ -2.25
CDS1P38221 YDR210WYDR210W 228 nt0.99□□□□□ -2.25
CDS1P38221 YBR072C-AYBR072C-A 162 nt0.99□□□□□ -2.25
CDS1P38221 YJR029WYJR029W 5268 nt0.98□□□□□ -2.25
CDS1P38221 YPR137C-BYPR137C-B 5268 nt0.98□□□□□ -2.25
CDS1P38221 RKR1YMR247C 4689 nt0.98□□□□□ -2.25
CDS1P38221 YBR099CYBR099C 384 nt0.97□□□□□ -2.25
CDS1P38221 GLG1YKR058W 1851 nt0.96□□□□□ -2.26
CDS1P38221 YPR117WYPR117W 7470 nt0.96□□□□□ -2.26
CDS1P38221 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
CDS1P38221 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
CDS1P38221 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
CDS1P38221 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
CDS1P38221 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
CDS1P38221 RPM2YML091C 3609 nt0.94□□□□□ -2.26
CDS1P38221 Q0143Q0143 153 nt0.94□□□□□ -2.26
CDS1P38221 YGR146C-AYGR146C-A 162 nt0.93□□□□□ -2.26
CDS1P38221 tV(UAC)BtV(UAC)B 74 nt0.92□□□□□ -2.26
CDS1P38221 tV(UAC)DtV(UAC)D 74 nt0.92□□□□□ -2.26
CDS1P38221 ULP2YIL031W 3105 nt0.91□□□□□ -2.26
CDS1P38221 ANS1YHR126C 480 nt0.91□□□□□ -2.26
CDS1P38221 IML1YJR138W 4755 nt0.9□□□□□ -2.26
CDS1P38221 YLL006W-AYLL006W-A 177 nt0.9□□□□□ -2.27
CDS1P38221 NNF2YGR089W 2811 nt0.9□□□□□ -2.27
CDS1P38221 SEC1YDR164C 2175 nt0.9□□□□□ -2.27
CDS1P38221 SIP4YJL089W 2490 nt0.9□□□□□ -2.27
CDS1P38221 BEM2YER155C 6504 nt0.89□□□□□ -2.27
CDS1P38221 BUD3YCL014W 4911 nt0.88□□□□□ -2.27
CDS1P38221 YNL205CYNL205C 423 nt0.88□□□□□ -2.27
CDS1P38221 CSE1YGL238W 2883 nt0.88□□□□□ -2.27
CDS1P38221 snR85snR85 171 nt0.87□□□□□ -2.27
CDS1P38221 YIL071W-AYIL071W-A 477 nt0.87□□□□□ -2.27
CDS1P38221 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
CDS1P38221 DOP1YDR141C 5097 nt0.83□□□□□ -2.28
CDS1P38221 STF2YGR008C 255 nt0.83□□□□□ -2.28
CDS1P38221 HUG1YML058W-A 207 nt0.83□□□□□ -2.28
CDS1P38221 PET111YMR257C 2403 nt0.82□□□□□ -2.28
CDS1P38221 PMP2YEL017C-A 132 nt0.8□□□□□ -2.28
CDS1P38221 BIR1YJR089W 2865 nt0.79□□□□□ -2.28
CDS1P38221 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.29
CDS1P38221 YNL266WYNL266W 420 nt0.77□□□□□ -2.29
CDS1P38221 NIP1YMR309C 2439 nt0.76□□□□□ -2.29
CDS1P38221 MLP1YKR095W 5628 nt0.74□□□□□ -2.29
CDS1P38221 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
CDS1P38221 YBR178WYBR178W 375 nt0.72□□□□□ -2.29
CDS1P38221 RPS26AYGL189C 360 nt0.71□□□□□ -2.3
CDS1P38221 PAU24YBR301W 363 nt0.71□□□□□ -2.3
CDS1P38221 PAU12YGR294W 363 nt0.7□□□□□ -2.3
CDS1P38221 YDR371C-AYDR371C-A 105 nt0.69□□□□□ -2.3
CDS1P38221 YBR196C-AYBR196C-A 150 nt0.69□□□□□ -2.3
CDS1P38221 SEC10YLR166C 2616 nt0.68□□□□□ -2.3
CDS1P38221 YNL103W-AYNL103W-A 90 nt0.68□□□□□ -2.3
CDS1P38221 snR61snR61 90 nt0.67□□□□□ -2.3
CDS1P38221 YJL077W-AYJL077W-A 87 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms