Protein–RNA interactions for Protein: P21827

SRM1, Guanine nucleotide exchange factor SRM1, yeastyeast

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRM1P21827 SWI4YER111C 3282 nt1.78□□□□□ -2.12
SRM1P21827 EAF1YDR359C 2949 nt1.78□□□□□ -2.12
SRM1P21827 CDC25YLR310C 4770 nt1.78□□□□□ -2.13
SRM1P21827 CHS1YNL192W 3396 nt1.77□□□□□ -2.13
SRM1P21827 YJL127W-AYJL127W-A 117 nt1.77□□□□□ -2.13
SRM1P21827 YLR232WYLR232W 348 nt1.77□□□□□ -2.13
SRM1P21827 EST2YLR318W 2655 nt1.77□□□□□ -2.13
SRM1P21827 MEC1YBR136W 7107 nt1.76□□□□□ -2.13
SRM1P21827 MSH3YCR092C 3057 nt1.74□□□□□ -2.13
SRM1P21827 FYV10YIL097W 1551 nt1.74□□□□□ -2.13
SRM1P21827 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
SRM1P21827 RCO1YMR075W 2055 nt1.73□□□□□ -2.13
SRM1P21827 NUP145YGL092W 3954 nt1.73□□□□□ -2.13
SRM1P21827 snR81snR81 201 nt1.72□□□□□ -2.13
SRM1P21827 snR14snR14 160 nt1.72□□□□□ -2.13
SRM1P21827 snR45snR45 172 nt1.72□□□□□ -2.13
SRM1P21827 YLR419WYLR419W 4308 nt1.72□□□□□ -2.13
SRM1P21827 AZF1YOR113W 2745 nt1.72□□□□□ -2.13
SRM1P21827 SXM1YDR395W 2835 nt1.71□□□□□ -2.14
SRM1P21827 TRM732YMR259C 4263 nt1.71□□□□□ -2.14
SRM1P21827 NOP9YJL010C 2001 nt1.71□□□□□ -2.14
SRM1P21827 NUP157YER105C 4176 nt1.7□□□□□ -2.14
SRM1P21827 WAR1YML076C 2835 nt1.69□□□□□ -2.14
SRM1P21827 KAP120YPL125W 3099 nt1.69□□□□□ -2.14
SRM1P21827 RPL26BYGR034W 384 nt1.69□□□□□ -2.14
SRM1P21827 YAL037C-AYAL037C-A 93 nt1.69□□□□□ -2.14
SRM1P21827 YLR041WYLR041W 321 nt1.69□□□□□ -2.14
SRM1P21827 YNL266WYNL266W 420 nt1.69□□□□□ -2.14
SRM1P21827 snR190snR190 190 nt1.69□□□□□ -2.14
SRM1P21827 STO1YMR125W 2586 nt1.69□□□□□ -2.14
SRM1P21827 APL3YBL037W 3078 nt1.69□□□□□ -2.14
SRM1P21827 SET3YKR029C 2256 nt1.69□□□□□ -2.14
SRM1P21827 YDR210WYDR210W 228 nt1.68□□□□□ -2.14
SRM1P21827 GEA2YEL022W 4380 nt1.68□□□□□ -2.14
SRM1P21827 BIR1YJR089W 2865 nt1.67□□□□□ -2.14
SRM1P21827 PMD1YER132C 5262 nt1.67□□□□□ -2.14
SRM1P21827 SEC3YER008C 4011 nt1.67□□□□□ -2.14
SRM1P21827 YGR146C-AYGR146C-A 162 nt1.66□□□□□ -2.14
SRM1P21827 SPC110YDR356W 2835 nt1.65□□□□□ -2.14
SRM1P21827 YBR072C-AYBR072C-A 162 nt1.65□□□□□ -2.15
SRM1P21827 SEC1YDR164C 2175 nt1.64□□□□□ -2.15
SRM1P21827 BEM3YPL115C 3387 nt1.63□□□□□ -2.15
SRM1P21827 YBR200W-AYBR200W-A 165 nt1.62□□□□□ -2.15
SRM1P21827 NUP188YML103C 4968 nt1.61□□□□□ -2.15
SRM1P21827 YGR130CYGR130C 2451 nt1.61□□□□□ -2.15
SRM1P21827 COG6YNL041C 2520 nt1.61□□□□□ -2.15
SRM1P21827 snR62snR62 100 nt1.61□□□□□ -2.15
SRM1P21827 YOL083C-AYOL083C-A 141 nt1.6□□□□□ -2.15
SRM1P21827 PRP16YKR086W 3216 nt1.6□□□□□ -2.15
SRM1P21827 VPS15YBR097W 4365 nt1.6□□□□□ -2.15
SRM1P21827 RAD9YDR217C 3930 nt1.59□□□□□ -2.15
SRM1P21827 LAA1YJL207C 6045 nt1.59□□□□□ -2.15
SRM1P21827 IRA1YBR140C 9279 nt1.57□□□□□ -2.16
SRM1P21827 YBR196C-AYBR196C-A 150 nt1.56□□□□□ -2.16
SRM1P21827 YDL073WYDL073W 2955 nt1.56□□□□□ -2.16
SRM1P21827 HUG1YML058W-A 207 nt1.55□□□□□ -2.16
SRM1P21827 SSK2YNR031C 4740 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)E1tH(GUG)E1 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)E2tH(GUG)E2 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)G1tH(GUG)G1 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)G2tH(GUG)G2 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)HtH(GUG)H 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)KtH(GUG)K 72 nt1.54□□□□□ -2.16
SRM1P21827 tH(GUG)MtH(GUG)M 72 nt1.54□□□□□ -2.16
SRM1P21827 YBL100W-CYBL100W-C 120 nt1.54□□□□□ -2.16
SRM1P21827 SEC8YPR055W 3198 nt1.53□□□□□ -2.17
SRM1P21827 IML1YJR138W 4755 nt1.52□□□□□ -2.17
SRM1P21827 CCH1YGR217W 6120 nt1.51□□□□□ -2.17
SRM1P21827 CDC39YCR093W 6327 nt1.5□□□□□ -2.17
SRM1P21827 UBP3YER151C 2739 nt1.5□□□□□ -2.17
SRM1P21827 HKR1YDR420W 5409 nt1.48□□□□□ -2.17
SRM1P21827 YBL071C-BYBL071C-B 99 nt1.48□□□□□ -2.17
SRM1P21827 YLR399W-AYLR399W-A 105 nt1.47□□□□□ -2.17
SRM1P21827 ASE1YOR058C 2658 nt1.47□□□□□ -2.17
SRM1P21827 RPM2YML091C 3609 nt1.47□□□□□ -2.17
SRM1P21827 YDR034C-AYDR034C-A 177 nt1.45□□□□□ -2.18
SRM1P21827 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
SRM1P21827 SEC10YLR166C 2616 nt1.44□□□□□ -2.18
SRM1P21827 tQ(UUG)E2tQ(UUG)E2 72 nt1.44□□□□□ -2.18
SRM1P21827 YSP1YHR155W 3687 nt1.43□□□□□ -2.18
SRM1P21827 tN(GUU)QtN(GUU)Q 71 nt1.42□□□□□ -2.18
SRM1P21827 NST1YNL091W 3723 nt1.42□□□□□ -2.18
SRM1P21827 RPS26AYGL189C 360 nt1.41□□□□□ -2.18
SRM1P21827 YGR240C-AYGR240C-A 201 nt1.41□□□□□ -2.18
SRM1P21827 YPR160W-AYPR160W-A 81 nt1.41□□□□□ -2.18
SRM1P21827 GLG1YKR058W 1851 nt1.4□□□□□ -2.19
SRM1P21827 YOL164W-AYOL164W-A 183 nt1.4□□□□□ -2.19
SRM1P21827 tV(UAC)BtV(UAC)B 74 nt1.39□□□□□ -2.19
SRM1P21827 tV(UAC)DtV(UAC)D 74 nt1.39□□□□□ -2.19
SRM1P21827 SIP4YJL089W 2490 nt1.37□□□□□ -2.19
SRM1P21827 YLR286W-AYLR286W-A 135 nt1.37□□□□□ -2.19
SRM1P21827 NNF2YGR089W 2811 nt1.36□□□□□ -2.19
SRM1P21827 ULP2YIL031W 3105 nt1.34□□□□□ -2.2
SRM1P21827 tD(GUC)QtD(GUC)Q 75 nt1.32□□□□□ -2.2
SRM1P21827 snR47snR47 99 nt1.32□□□□□ -2.2
SRM1P21827 PET127YOR017W 2403 nt1.31□□□□□ -2.2
SRM1P21827 FYV8YGR196C 2454 nt1.31□□□□□ -2.2
SRM1P21827 CSE1YGL238W 2883 nt1.3□□□□□ -2.2
SRM1P21827 YLR299C-AYLR299C-A 93 nt1.27□□□□□ -2.21
SRM1P21827 YNL284C-BYNL284C-B 5268 nt1.26□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 78.5 ms