Protein–RNA interactions for Protein: Q04603

DPB4, DNA polymerase epsilon subunit D, yeastyeast

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DPB4Q04603 ECM12YHR021W-A 456 nt1.2□□□□□ -2.22
DPB4Q04603 YOL155W-AYOL155W-A 135 nt1.2□□□□□ -2.22
DPB4Q04603 tF(GAA)QtF(GAA)Q 75 nt1.19□□□□□ -2.22
DPB4Q04603 OLI1Q0130 231 nt1.19□□□□□ -2.22
DPB4Q04603 SGF11YPL047W 300 nt1.19□□□□□ -2.22
DPB4Q04603 YDR366CYDR366C 399 nt1.18□□□□□ -2.22
DPB4Q04603 NUP192YJL039C 5052 nt1.17□□□□□ -2.22
DPB4Q04603 snR74snR74 88 nt1.17□□□□□ -2.22
DPB4Q04603 YOR072W-BYOR072W-B 162 nt1.17□□□□□ -2.22
DPB4Q04603 KAP120YPL125W 3099 nt1.16□□□□□ -2.22
DPB4Q04603 ABF2YMR072W 552 nt1.16□□□□□ -2.22
DPB4Q04603 YDR354C-AYDR354C-A 144 nt1.15□□□□□ -2.23
DPB4Q04603 YJL026C-AYJL026C-A 222 nt1.15□□□□□ -2.23
DPB4Q04603 SMC1YFL008W 3678 nt1.14□□□□□ -2.23
DPB4Q04603 YIR030W-AYIR030W-A 384 nt1.14□□□□□ -2.23
DPB4Q04603 YLL019W-AYLL019W-A 93 nt1.14□□□□□ -2.23
DPB4Q04603 APL1YJR005W 2103 nt1.13□□□□□ -2.23
DPB4Q04603 NOP9YJL010C 2001 nt1.13□□□□□ -2.23
DPB4Q04603 PAA1YDR071C 576 nt1.13□□□□□ -2.23
DPB4Q04603 YGL041CYGL041C 204 nt1.13□□□□□ -2.23
DPB4Q04603 CMC4YMR194C-B 222 nt1.13□□□□□ -2.23
DPB4Q04603 YNL211CYNL211C 261 nt1.13□□□□□ -2.23
DPB4Q04603 YAL067W-AYAL067W-A 228 nt1.12□□□□□ -2.23
DPB4Q04603 snR80snR80 171 nt1.11□□□□□ -2.23
DPB4Q04603 NPR2YEL062W 1848 nt1.1□□□□□ -2.23
DPB4Q04603 YKU70YMR284W 1809 nt1.1□□□□□ -2.23
DPB4Q04603 YPL044CYPL044C 549 nt1.1□□□□□ -2.23
DPB4Q04603 YBR182C-AYBR182C-A 195 nt1.1□□□□□ -2.23
DPB4Q04603 YDL196WYDL196W 330 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)E1tH(GUG)E1 72 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)E2tH(GUG)E2 72 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)G1tH(GUG)G1 72 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)G2tH(GUG)G2 72 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)HtH(GUG)H 72 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)KtH(GUG)K 72 nt1.09□□□□□ -2.23
DPB4Q04603 ISD11YER048W-A 285 nt1.09□□□□□ -2.23
DPB4Q04603 tH(GUG)MtH(GUG)M 72 nt1.09□□□□□ -2.23
DPB4Q04603 GEA2YEL022W 4380 nt1.08□□□□□ -2.24
DPB4Q04603 YJR029WYJR029W 5268 nt1.07□□□□□ -2.24
DPB4Q04603 YPR137C-BYPR137C-B 5268 nt1.07□□□□□ -2.24
DPB4Q04603 ASE1YOR058C 2658 nt1.07□□□□□ -2.24
DPB4Q04603 MSH3YCR092C 3057 nt1.07□□□□□ -2.24
DPB4Q04603 RPL33BYOR234C 324 nt1.06□□□□□ -2.24
DPB4Q04603 RPL26BYGR034W 384 nt1.05□□□□□ -2.24
DPB4Q04603 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
DPB4Q04603 YMR158W-BYMR158W-B 321 nt1.04□□□□□ -2.24
DPB4Q04603 YOR302WYOR302W 78 nt1.04□□□□□ -2.24
DPB4Q04603 PRP16YKR086W 3216 nt1.04□□□□□ -2.24
DPB4Q04603 TTI1YKL033W 3117 nt1.03□□□□□ -2.24
DPB4Q04603 EMT1tM(CAU)D 73 nt1.03□□□□□ -2.24
DPB4Q04603 EMT5tM(CAU)J1 73 nt1.03□□□□□ -2.24
DPB4Q04603 EMT3tM(CAU)J2 73 nt1.03□□□□□ -2.24
DPB4Q04603 EMT4tM(CAU)M 73 nt1.03□□□□□ -2.24
DPB4Q04603 EMT2tM(CAU)O2 73 nt1.03□□□□□ -2.24
DPB4Q04603 YFR012W-AYFR012W-A 87 nt1.02□□□□□ -2.25
DPB4Q04603 LAA1YJL207C 6045 nt1.01□□□□□ -2.25
DPB4Q04603 YDL185C-AYDL185C-A 228 nt1.01□□□□□ -2.25
DPB4Q04603 YCR018C-AYCR018C-A 255 nt1□□□□□ -2.25
DPB4Q04603 PMP1YCR024C-A 123 nt1□□□□□ -2.25
DPB4Q04603 HAL9YOL089C 3093 nt0.99□□□□□ -2.25
DPB4Q04603 YDL073WYDL073W 2955 nt0.99□□□□□ -2.25
DPB4Q04603 SPG3YDR504C 384 nt0.99□□□□□ -2.25
DPB4Q04603 COX12YLR038C 252 nt0.99□□□□□ -2.25
DPB4Q04603 BFR2YDR299W 1605 nt0.98□□□□□ -2.25
DPB4Q04603 RPS30BYOR182C 192 nt0.98□□□□□ -2.25
DPB4Q04603 COY1YKL179C 2040 nt0.98□□□□□ -2.25
DPB4Q04603 SEC8YPR055W 3198 nt0.98□□□□□ -2.25
DPB4Q04603 ULI1YFR026C 510 nt0.97□□□□□ -2.25
DPB4Q04603 YGL123C-AYGL123C-A 231 nt0.97□□□□□ -2.25
DPB4Q04603 APQ12YIL040W 417 nt0.97□□□□□ -2.25
DPB4Q04603 YLR282CYLR282C 342 nt0.97□□□□□ -2.25
DPB4Q04603 YOR345CYOR345C 351 nt0.97□□□□□ -2.25
DPB4Q04603 snR190snR190 190 nt0.97□□□□□ -2.25
DPB4Q04603 YGR130CYGR130C 2451 nt0.97□□□□□ -2.25
DPB4Q04603 SCC2YDR180W 4482 nt0.96□□□□□ -2.26
DPB4Q04603 COX5BYIL111W 456 nt0.96□□□□□ -2.26
DPB4Q04603 YIL134C-AYIL134C-A 204 nt0.96□□□□□ -2.26
DPB4Q04603 YKL100W-AYKL100W-A 90 nt0.96□□□□□ -2.26
DPB4Q04603 YNL097C-BYNL097C-B 123 nt0.96□□□□□ -2.26
DPB4Q04603 SPT7YBR081C 3999 nt0.96□□□□□ -2.26
DPB4Q04603 tV(UAC)BtV(UAC)B 74 nt0.95□□□□□ -2.26
DPB4Q04603 tV(UAC)DtV(UAC)D 74 nt0.95□□□□□ -2.26
DPB4Q04603 YBR131C-AYBR131C-A 90 nt0.95□□□□□ -2.26
DPB4Q04603 BLI1YKL061W 342 nt0.94□□□□□ -2.26
DPB4Q04603 YLR399W-AYLR399W-A 105 nt0.93□□□□□ -2.26
DPB4Q04603 YMR046W-AYMR046W-A 129 nt0.93□□□□□ -2.26
DPB4Q04603 JLP2YMR132C 627 nt0.93□□□□□ -2.26
DPB4Q04603 YOR161W-AYOR161W-A 81 nt0.93□□□□□ -2.26
DPB4Q04603 YPR160W-AYPR160W-A 81 nt0.93□□□□□ -2.26
DPB4Q04603 SIP4YJL089W 2490 nt0.93□□□□□ -2.26
DPB4Q04603 ANS1YHR126C 480 nt0.92□□□□□ -2.26
DPB4Q04603 YIL002W-AYIL002W-A 210 nt0.92□□□□□ -2.26
DPB4Q04603 YML002WYML002W 2214 nt0.91□□□□□ -2.26
DPB4Q04603 tM(CAU)Q1tM(CAU)Q1 76 nt0.91□□□□□ -2.26
DPB4Q04603 YLR041WYLR041W 321 nt0.9□□□□□ -2.27
DPB4Q04603 YCR038W-AYCR038W-A 126 nt0.89□□□□□ -2.27
DPB4Q04603 BEM2YER155C 6504 nt0.88□□□□□ -2.27
DPB4Q04603 IML1YJR138W 4755 nt0.88□□□□□ -2.27
DPB4Q04603 YER053C-AYER053C-A 114 nt0.88□□□□□ -2.27
DPB4Q04603 PAM16YJL104W 450 nt0.88□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms