Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 tF(GAA)NtF(GAA)N 73 nt2.28□□□□□ -2.04
TY1A-MR1Q04215 GCN2YDR283C 4980 nt2.27□□□□□ -2.05
TY1A-MR1Q04215 TRL1YJL087C 2484 nt2.27□□□□□ -2.05
TY1A-MR1Q04215 ALY2YJL084C 3141 nt2.26□□□□□ -2.05
TY1A-MR1Q04215 RSE1YML049C 4086 nt2.26□□□□□ -2.05
TY1A-MR1Q04215 TRS130YMR218C 3309 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 RPM2YML091C 3609 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 SMC1YFL008W 3678 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 YBR200W-AYBR200W-A 165 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 TRM3YDL112W 4311 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 RGA1YOR127W 3024 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 TCB2YNL087W 3537 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 UBP3YER151C 2739 nt2.25□□□□□ -2.05
TY1A-MR1Q04215 TOF1YNL273W 3717 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 AZF1YOR113W 2745 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 SPO24YPR036W-A 204 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 YPR097WYPR097W 3222 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 PSD2YGR170W 3417 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 SPF1YEL031W 3648 nt2.24□□□□□ -2.05
TY1A-MR1Q04215 TOP2YNL088W 4287 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 RPL26BYGR034W 384 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 YOR055WYOR055W 435 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 PIK1YNL267W 3201 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 SYH1YPL105C 2550 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 PET309YLR067C 2898 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 PDR1YGL013C 3207 nt2.23□□□□□ -2.05
TY1A-MR1Q04215 GEA1YJR031C 4227 nt2.22□□□□□ -2.05
TY1A-MR1Q04215 GIP3YPL137C 3831 nt2.22□□□□□ -2.05
TY1A-MR1Q04215 TRA1YHR099W 11235 nt2.22□□□□□ -2.05
TY1A-MR1Q04215 WAR1YML076C 2835 nt2.22□□□□□ -2.05
TY1A-MR1Q04215 YDR098C-BYDR098C-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YDR210C-DYDR210C-D 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YDR316W-BYDR316W-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YDR365W-BYDR365W-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YER138CYER138C 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YER160CYER160C 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YGR038C-BYGR038C-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YGR161C-DYGR161C-D 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YJR027WYJR027W 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YLR157C-BYLR157C-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YML039WYML039W 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YML045WYML045W 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YMR050CYMR050C 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YOL103W-BYOL103W-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YBR012W-BYBR012W-B 5271 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YOR142W-BYOR142W-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YPL257W-BYPL257W-B 5268 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YPR158W-BYPR158W-B 5271 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 YIL082W-AYIL082W-A 4497 nt2.21□□□□□ -2.06
TY1A-MR1Q04215 GYP5YPL249C 2685 nt2.2□□□□□ -2.06
TY1A-MR1Q04215 MYO2YOR326W 4725 nt2.19□□□□□ -2.06
TY1A-MR1Q04215 RAD9YDR217C 3930 nt2.19□□□□□ -2.06
TY1A-MR1Q04215 HIR3YJR140C 4947 nt2.18□□□□□ -2.06
TY1A-MR1Q04215 SFB2YNL049C 2631 nt2.18□□□□□ -2.06
TY1A-MR1Q04215 YDL159W-AYDL159W-A 132 nt2.18□□□□□ -2.06
TY1A-MR1Q04215 PAN2YGL094C 3348 nt2.17□□□□□ -2.06
TY1A-MR1Q04215 VPS13YLL040C 9435 nt2.17□□□□□ -2.06
TY1A-MR1Q04215 snR190snR190 190 nt2.17□□□□□ -2.06
TY1A-MR1Q04215 RAV1YJR033C 4074 nt2.16□□□□□ -2.06
TY1A-MR1Q04215 YAR009CYAR009C 3591 nt2.16□□□□□ -2.06
TY1A-MR1Q04215 BEM3YPL115C 3387 nt2.15□□□□□ -2.07
TY1A-MR1Q04215 NNF2YGR089W 2811 nt2.15□□□□□ -2.07
TY1A-MR1Q04215 YDL073WYDL073W 2955 nt2.15□□□□□ -2.07
TY1A-MR1Q04215 YLR299C-AYLR299C-A 93 nt2.14□□□□□ -2.07
TY1A-MR1Q04215 NUT1YGL151W 3399 nt2.13□□□□□ -2.07
TY1A-MR1Q04215 KOG1YHR186C 4674 nt2.13□□□□□ -2.07
TY1A-MR1Q04215 BPH1YCR032W 6504 nt2.13□□□□□ -2.07
TY1A-MR1Q04215 KRE33YNL132W 3171 nt2.12□□□□□ -2.07
TY1A-MR1Q04215 MGA2YIR033W 3342 nt2.12□□□□□ -2.07
TY1A-MR1Q04215 tD(GUC)QtD(GUC)Q 75 nt2.12□□□□□ -2.07
TY1A-MR1Q04215 YJL052C-AYJL052C-A 120 nt2.12□□□□□ -2.07
TY1A-MR1Q04215 TUS1YLR425W 3924 nt2.11□□□□□ -2.07
TY1A-MR1Q04215 RAD50YNL250W 3939 nt2.11□□□□□ -2.07
TY1A-MR1Q04215 FAR11YNL127W 2862 nt2.11□□□□□ -2.07
TY1A-MR1Q04215 UTP21YLR409C 2820 nt2.09□□□□□ -2.07
TY1A-MR1Q04215 YOL098CYOL098C 3114 nt2.09□□□□□ -2.07
TY1A-MR1Q04215 ANS1YHR126C 480 nt2.09□□□□□ -2.07
TY1A-MR1Q04215 DNF1YER166W 4716 nt2.09□□□□□ -2.08
TY1A-MR1Q04215 MSH6YDR097C 3729 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 SKI7YOR076C 2244 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 FKS3YMR306W 5358 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 CHS1YNL192W 3396 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 PDR11YIL013C 4236 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 BRE1YDL074C 2103 nt2.08□□□□□ -2.08
TY1A-MR1Q04215 SGS1YMR190C 4344 nt2.07□□□□□ -2.08
TY1A-MR1Q04215 SCD5YOR329C 2619 nt2.07□□□□□ -2.08
TY1A-MR1Q04215 MSB1YOR188W 3414 nt2.07□□□□□ -2.08
TY1A-MR1Q04215 RTT101YJL047C 2529 nt2.07□□□□□ -2.08
TY1A-MR1Q04215 RPL41AYDL184C 78 nt2.06□□□□□ -2.08
TY1A-MR1Q04215 NAB6YML117W 3405 nt2.05□□□□□ -2.08
TY1A-MR1Q04215 YLR419WYLR419W 4308 nt2.04□□□□□ -2.08
TY1A-MR1Q04215 IRA2YOL081W 9240 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 YDL159C-BYDL159C-B 177 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 YGR122C-AYGR122C-A 129 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)G1tW(CCA)G1 72 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)G2tW(CCA)G2 72 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)JtW(CCA)J 72 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)KtW(CCA)K 72 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)MtW(CCA)M 72 nt2.03□□□□□ -2.08
TY1A-MR1Q04215 tW(CCA)PtW(CCA)P 72 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 37.4 ms