Protein–RNA interactions for Protein: Q03430

RSM28, 37S ribosomal protein RSM28, mitochondrial, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSM28Q03430 RAD9YDR217C 3930 nt1.35□□□□□ -2.19
RSM28Q03430 MSH3YCR092C 3057 nt1.35□□□□□ -2.19
RSM28Q03430 NUP188YML103C 4968 nt1.35□□□□□ -2.19
RSM28Q03430 FIG2YCR089W 4830 nt1.34□□□□□ -2.19
RSM28Q03430 YIR030W-AYIR030W-A 384 nt1.34□□□□□ -2.19
RSM28Q03430 JLP2YMR132C 627 nt1.34□□□□□ -2.19
RSM28Q03430 YOR302WYOR302W 78 nt1.34□□□□□ -2.19
RSM28Q03430 YLL019W-AYLL019W-A 93 nt1.33□□□□□ -2.2
RSM28Q03430 YKU70YMR284W 1809 nt1.33□□□□□ -2.2
RSM28Q03430 CDC39YCR093W 6327 nt1.33□□□□□ -2.2
RSM28Q03430 ROM2YLR371W 4071 nt1.32□□□□□ -2.2
RSM28Q03430 CDC31YOR257W 486 nt1.32□□□□□ -2.2
RSM28Q03430 NUP145YGL092W 3954 nt1.32□□□□□ -2.2
RSM28Q03430 tM(CAU)Q1tM(CAU)Q1 76 nt1.31□□□□□ -2.2
RSM28Q03430 BLI1YKL061W 342 nt1.31□□□□□ -2.2
RSM28Q03430 YLL020CYLL020C 306 nt1.31□□□□□ -2.2
RSM28Q03430 SMC1YFL008W 3678 nt1.3□□□□□ -2.2
RSM28Q03430 YDR354C-AYDR354C-A 144 nt1.3□□□□□ -2.2
RSM28Q03430 YPR117WYPR117W 7470 nt1.3□□□□□ -2.2
RSM28Q03430 WAR1YML076C 2835 nt1.3□□□□□ -2.2
RSM28Q03430 OLI1Q0130 231 nt1.29□□□□□ -2.2
RSM28Q03430 APQ12YIL040W 417 nt1.29□□□□□ -2.2
RSM28Q03430 YMR046W-AYMR046W-A 129 nt1.29□□□□□ -2.2
RSM28Q03430 YBR200W-AYBR200W-A 165 nt1.29□□□□□ -2.2
RSM28Q03430 NST1YNL091W 3723 nt1.29□□□□□ -2.2
RSM28Q03430 EAF1YDR359C 2949 nt1.28□□□□□ -2.2
RSM28Q03430 YDL196WYDL196W 330 nt1.28□□□□□ -2.2
RSM28Q03430 ISD11YER048W-A 285 nt1.28□□□□□ -2.2
RSM28Q03430 STB6YKL072W 2301 nt1.28□□□□□ -2.2
RSM28Q03430 YJL026C-AYJL026C-A 222 nt1.27□□□□□ -2.21
RSM28Q03430 YDR406W-AYDR406W-A 246 nt1.25□□□□□ -2.21
RSM28Q03430 SEC3YER008C 4011 nt1.25□□□□□ -2.21
RSM28Q03430 APL1YJR005W 2103 nt1.25□□□□□ -2.21
RSM28Q03430 NUP157YER105C 4176 nt1.25□□□□□ -2.21
RSM28Q03430 YNL211CYNL211C 261 nt1.24□□□□□ -2.21
RSM28Q03430 ULI1YFR026C 510 nt1.23□□□□□ -2.21
RSM28Q03430 YAL067W-AYAL067W-A 228 nt1.23□□□□□ -2.21
RSM28Q03430 GEA2YEL022W 4380 nt1.22□□□□□ -2.21
RSM28Q03430 CDC25YLR310C 4770 nt1.22□□□□□ -2.21
RSM28Q03430 YNL097C-BYNL097C-B 123 nt1.22□□□□□ -2.21
RSM28Q03430 YOR345CYOR345C 351 nt1.22□□□□□ -2.21
RSM28Q03430 YBR131C-AYBR131C-A 90 nt1.22□□□□□ -2.21
RSM28Q03430 PAA1YDR071C 576 nt1.21□□□□□ -2.22
RSM28Q03430 PAM16YJL104W 450 nt1.21□□□□□ -2.22
RSM28Q03430 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
RSM28Q03430 NOP9YJL010C 2001 nt1.2□□□□□ -2.22
RSM28Q03430 KAP120YPL125W 3099 nt1.2□□□□□ -2.22
RSM28Q03430 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
RSM28Q03430 YPL044CYPL044C 549 nt1.18□□□□□ -2.22
RSM28Q03430 YDL185C-AYDL185C-A 228 nt1.17□□□□□ -2.22
RSM28Q03430 VAM6YDL077C 3150 nt1.17□□□□□ -2.22
RSM28Q03430 TTI1YKL033W 3117 nt1.16□□□□□ -2.22
RSM28Q03430 YEL014CYEL014C 306 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)E1tH(GUG)E1 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)E2tH(GUG)E2 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)G1tH(GUG)G1 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)G2tH(GUG)G2 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)HtH(GUG)H 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)KtH(GUG)K 72 nt1.16□□□□□ -2.22
RSM28Q03430 tH(GUG)MtH(GUG)M 72 nt1.16□□□□□ -2.22
RSM28Q03430 RPS30BYOR182C 192 nt1.16□□□□□ -2.22
RSM28Q03430 YGR130CYGR130C 2451 nt1.16□□□□□ -2.22
RSM28Q03430 DOP1YDR141C 5097 nt1.16□□□□□ -2.22
RSM28Q03430 YIL134C-AYIL134C-A 204 nt1.15□□□□□ -2.23
RSM28Q03430 YFR012W-AYFR012W-A 87 nt1.13□□□□□ -2.23
RSM28Q03430 RPL26BYGR034W 384 nt1.13□□□□□ -2.23
RSM28Q03430 COX12YLR038C 252 nt1.13□□□□□ -2.23
RSM28Q03430 ASE1YOR058C 2658 nt1.13□□□□□ -2.23
RSM28Q03430 HAL9YOL089C 3093 nt1.12□□□□□ -2.23
RSM28Q03430 YCR018C-AYCR018C-A 255 nt1.12□□□□□ -2.23
RSM28Q03430 COY1YKL179C 2040 nt1.11□□□□□ -2.23
RSM28Q03430 YNL337WYNL337W 255 nt1.11□□□□□ -2.23
RSM28Q03430 RPL33BYOR234C 324 nt1.11□□□□□ -2.23
RSM28Q03430 PRP16YKR086W 3216 nt1.11□□□□□ -2.23
RSM28Q03430 SPT7YBR081C 3999 nt1.1□□□□□ -2.23
RSM28Q03430 YGL123C-AYGL123C-A 231 nt1.1□□□□□ -2.23
RSM28Q03430 YCR038W-AYCR038W-A 126 nt1.09□□□□□ -2.23
RSM28Q03430 snR46snR46 197 nt1.09□□□□□ -2.23
RSM28Q03430 YNL284C-BYNL284C-B 5268 nt1.09□□□□□ -2.24
RSM28Q03430 YLR282CYLR282C 342 nt1.08□□□□□ -2.24
RSM28Q03430 IML1YJR138W 4755 nt1.07□□□□□ -2.24
RSM28Q03430 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
RSM28Q03430 YIL002W-AYIL002W-A 210 nt1.07□□□□□ -2.24
RSM28Q03430 COX5BYIL111W 456 nt1.07□□□□□ -2.24
RSM28Q03430 YKL100W-AYKL100W-A 90 nt1.07□□□□□ -2.24
RSM28Q03430 YOR161W-AYOR161W-A 81 nt1.07□□□□□ -2.24
RSM28Q03430 snR190snR190 190 nt1.06□□□□□ -2.24
RSM28Q03430 PMP1YCR024C-A 123 nt1.05□□□□□ -2.24
RSM28Q03430 EMT1tM(CAU)D 73 nt1.05□□□□□ -2.24
RSM28Q03430 EMT5tM(CAU)J1 73 nt1.05□□□□□ -2.24
RSM28Q03430 EMT3tM(CAU)J2 73 nt1.05□□□□□ -2.24
RSM28Q03430 EMT4tM(CAU)M 73 nt1.05□□□□□ -2.24
RSM28Q03430 EMT2tM(CAU)O2 73 nt1.05□□□□□ -2.24
RSM28Q03430 tV(UAC)BtV(UAC)B 74 nt1.05□□□□□ -2.24
RSM28Q03430 tV(UAC)DtV(UAC)D 74 nt1.05□□□□□ -2.24
RSM28Q03430 BEM2YER155C 6504 nt1.04□□□□□ -2.24
RSM28Q03430 YER053C-AYER053C-A 114 nt1.04□□□□□ -2.24
RSM28Q03430 YML002WYML002W 2214 nt1.03□□□□□ -2.24
RSM28Q03430 YJL150WYJL150W 303 nt1.03□□□□□ -2.24
RSM28Q03430 snR52snR52 92 nt1.03□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms