Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 BUD3YCL014W 4911 nt0.75□□□□□ -2.29
SMD1Q02260 CMC4YMR194C-B 222 nt0.75□□□□□ -2.29
SMD1Q02260 YNL211CYNL211C 261 nt0.75□□□□□ -2.29
SMD1Q02260 YNL028WYNL028W 318 nt0.74□□□□□ -2.29
SMD1Q02260 YNL146WYNL146W 303 nt0.74□□□□□ -2.29
SMD1Q02260 IES4YOR189W 351 nt0.74□□□□□ -2.29
SMD1Q02260 RAD61YDR014W 1944 nt0.74□□□□□ -2.29
SMD1Q02260 SIP4YJL089W 2490 nt0.73□□□□□ -2.29
SMD1Q02260 YGR069WYGR069W 336 nt0.73□□□□□ -2.29
SMD1Q02260 YPR010C-AYPR010C-A 219 nt0.73□□□□□ -2.29
SMD1Q02260 RKR1YMR247C 4689 nt0.73□□□□□ -2.29
SMD1Q02260 NOP9YJL010C 2001 nt0.72□□□□□ -2.29
SMD1Q02260 BFR2YDR299W 1605 nt0.72□□□□□ -2.29
SMD1Q02260 YPR117WYPR117W 7470 nt0.72□□□□□ -2.29
SMD1Q02260 KAP120YPL125W 3099 nt0.72□□□□□ -2.29
SMD1Q02260 YDR354C-AYDR354C-A 144 nt0.72□□□□□ -2.29
SMD1Q02260 ISD11YER048W-A 285 nt0.72□□□□□ -2.29
SMD1Q02260 YOR015WYOR015W 360 nt0.72□□□□□ -2.29
SMD1Q02260 YPL044CYPL044C 549 nt0.72□□□□□ -2.29
SMD1Q02260 LAA1YJL207C 6045 nt0.72□□□□□ -2.29
SMD1Q02260 DOP1YDR141C 5097 nt0.71□□□□□ -2.3
SMD1Q02260 YFR012W-AYFR012W-A 87 nt0.71□□□□□ -2.3
SMD1Q02260 MSH3YCR092C 3057 nt0.7□□□□□ -2.3
SMD1Q02260 YOR282WYOR282W 321 nt0.7□□□□□ -2.3
SMD1Q02260 PAA1YDR071C 576 nt0.69□□□□□ -2.3
SMD1Q02260 YNL277W-AYNL277W-A 189 nt0.69□□□□□ -2.3
SMD1Q02260 BEM2YER155C 6504 nt0.69□□□□□ -2.3
SMD1Q02260 TTI1YKL033W 3117 nt0.69□□□□□ -2.3
SMD1Q02260 YGR130CYGR130C 2451 nt0.69□□□□□ -2.3
SMD1Q02260 snR65snR65 100 nt0.68□□□□□ -2.3
SMD1Q02260 YLR120W-AYLR120W-A 102 nt0.68□□□□□ -2.3
SMD1Q02260 YLL019W-AYLL019W-A 93 nt0.67□□□□□ -2.3
SMD1Q02260 PMP1YCR024C-A 123 nt0.66□□□□□ -2.3
SMD1Q02260 YGL052WYGL052W 306 nt0.66□□□□□ -2.3
SMD1Q02260 RPL26BYGR034W 384 nt0.66□□□□□ -2.3
SMD1Q02260 YJL197C-AYJL197C-A 282 nt0.66□□□□□ -2.3
SMD1Q02260 ASE1YOR058C 2658 nt0.65□□□□□ -2.3
SMD1Q02260 YDL185C-AYDL185C-A 228 nt0.65□□□□□ -2.31
SMD1Q02260 YAL067W-AYAL067W-A 228 nt0.65□□□□□ -2.31
SMD1Q02260 YMR172C-AYMR172C-A 384 nt0.65□□□□□ -2.31
SMD1Q02260 YOR008C-AYOR008C-A 225 nt0.65□□□□□ -2.31
SMD1Q02260 YPR092WYPR092W 306 nt0.65□□□□□ -2.31
SMD1Q02260 YCR018C-AYCR018C-A 255 nt0.64□□□□□ -2.31
SMD1Q02260 YEL020C-BYEL020C-B 198 nt0.64□□□□□ -2.31
SMD1Q02260 YJL026C-AYJL026C-A 222 nt0.64□□□□□ -2.31
SMD1Q02260 YOR231C-AYOR231C-A 201 nt0.64□□□□□ -2.31
SMD1Q02260 snR74snR74 88 nt0.63□□□□□ -2.31
SMD1Q02260 YOR072W-BYOR072W-B 162 nt0.63□□□□□ -2.31
SMD1Q02260 NPR2YEL062W 1848 nt0.63□□□□□ -2.31
SMD1Q02260 COY1YKL179C 2040 nt0.61□□□□□ -2.31
SMD1Q02260 YHR063W-AYHR063W-A 336 nt0.61□□□□□ -2.31
SMD1Q02260 snR190snR190 190 nt0.61□□□□□ -2.31
SMD1Q02260 PAU24YBR301W 363 nt0.61□□□□□ -2.31
SMD1Q02260 CHS6YJL099W 2241 nt0.6□□□□□ -2.31
SMD1Q02260 YDL073WYDL073W 2955 nt0.6□□□□□ -2.31
SMD1Q02260 IML1YJR138W 4755 nt0.59□□□□□ -2.31
SMD1Q02260 YMR307C-AYMR307C-A 195 nt0.59□□□□□ -2.31
SMD1Q02260 SEC1YDR164C 2175 nt0.59□□□□□ -2.32
SMD1Q02260 YML002WYML002W 2214 nt0.58□□□□□ -2.32
SMD1Q02260 YER181CYER181C 324 nt0.58□□□□□ -2.32
SMD1Q02260 ANS1YHR126C 480 nt0.58□□□□□ -2.32
SMD1Q02260 YOR161W-AYOR161W-A 81 nt0.58□□□□□ -2.32
SMD1Q02260 SEC8YPR055W 3198 nt0.57□□□□□ -2.32
SMD1Q02260 COX5BYIL111W 456 nt0.57□□□□□ -2.32
SMD1Q02260 YLR282CYLR282C 342 nt0.57□□□□□ -2.32
SMD1Q02260 YPL152W-AYPL152W-A 99 nt0.57□□□□□ -2.32
SMD1Q02260 YGL123C-AYGL123C-A 231 nt0.56□□□□□ -2.32
SMD1Q02260 YPR160W-AYPR160W-A 81 nt0.56□□□□□ -2.32
SMD1Q02260 PRP16YKR086W 3216 nt0.55□□□□□ -2.32
SMD1Q02260 RPS30BYOR182C 192 nt0.55□□□□□ -2.32
SMD1Q02260 YPR159C-AYPR159C-A 102 nt0.55□□□□□ -2.32
SMD1Q02260 snR49snR49 165 nt0.55□□□□□ -2.32
SMD1Q02260 FYV10YIL097W 1551 nt0.54□□□□□ -2.32
SMD1Q02260 snR55snR55 98 nt0.54□□□□□ -2.32
SMD1Q02260 YGL041CYGL041C 204 nt0.54□□□□□ -2.32
SMD1Q02260 YML099W-AYML099W-A 330 nt0.54□□□□□ -2.32
SMD1Q02260 tF(GAA)QtF(GAA)Q 75 nt0.53□□□□□ -2.32
SMD1Q02260 ULI1YFR026C 510 nt0.53□□□□□ -2.32
SMD1Q02260 tN(GUU)QtN(GUU)Q 71 nt0.53□□□□□ -2.32
SMD1Q02260 YLR399W-AYLR399W-A 105 nt0.53□□□□□ -2.32
SMD1Q02260 YIR030W-AYIR030W-A 384 nt0.52□□□□□ -2.33
SMD1Q02260 BLI1YKL061W 342 nt0.52□□□□□ -2.33
SMD1Q02260 COX12YLR038C 252 nt0.52□□□□□ -2.33
SMD1Q02260 YMR272W-AYMR272W-A 114 nt0.52□□□□□ -2.33
SMD1Q02260 PRP5YBR237W 2550 nt0.52□□□□□ -2.33
SMD1Q02260 UTP10YJL109C 5310 nt0.51□□□□□ -2.33
SMD1Q02260 YJL127W-AYJL127W-A 117 nt0.51□□□□□ -2.33
SMD1Q02260 LTE1YAL024C 4308 nt0.51□□□□□ -2.33
SMD1Q02260 YOR345CYOR345C 351 nt0.51□□□□□ -2.33
SMD1Q02260 MYO1YHR023W 5787 nt0.5□□□□□ -2.33
SMD1Q02260 YKU70YMR284W 1809 nt0.5□□□□□ -2.33
SMD1Q02260 YCR038W-AYCR038W-A 126 nt0.5□□□□□ -2.33
SMD1Q02260 YER053C-AYER053C-A 114 nt0.5□□□□□ -2.33
SMD1Q02260 YIL134C-AYIL134C-A 204 nt0.5□□□□□ -2.33
SMD1Q02260 PAM16YJL104W 450 nt0.5□□□□□ -2.33
SMD1Q02260 YOL155W-AYOL155W-A 135 nt0.5□□□□□ -2.33
SMD1Q02260 YBR182C-AYBR182C-A 195 nt0.5□□□□□ -2.33
SMD1Q02260 YOR192C-BYOR192C-B 5313 nt0.49□□□□□ -2.33
SMD1Q02260 OST4YDL232W 111 nt0.49□□□□□ -2.33
SMD1Q02260 UBP3YER151C 2739 nt0.49□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms